LOCUS MXAPILS 4698 bp DNA BCT 15-JAN-1997 DEFINITION Myxococcus xanthus sensor protein (pilS) gene, regulator protein (pilR) gene, and pilin (pilA) gene, complete cds's. ACCESSION L39904 NID g950651 KEYWORDS homologue; pilA gene; pilR gene; pilS gene; pilin; regulator protein; sensor protein. SOURCE Myxococcus xanthus (strain DK1622) DNA. ORGANISM Myxococcus xanthus Eubacteria; Proteobacteria; delta subdivision; Myxobacteria; Myxococcales; Myxococcaceae; Myxococcus. REFERENCE 1 (bases 1 to 4698) AUTHORS Wu,S.S. and Kaiser,D. TITLE Genetic and functional evidence that Type IV pili are required for social gliding motility in Myxococcus xanthus JOURNAL Mol. Microbiol. 18 (3), 547-558 (1995) MEDLINE 96342383 FEATURES Location/Qualifiers source 1..4698 /organism="Myxococcus xanthus" /strain="DK1622" gene 196..1773 /gene="pilS" CDS 196..1773 /gene="pilS" /standard_name="PilS protein" /note="Two plausible start codons exist for pilS, at base positions 196 and 432.; putative" /codon_start=1 /function="homolog to pilS of Pseudomonas aeruginosa, an NtrB-like sensor protein of a two-component regulatory system" /product="sensor protein" /db_xref="PID:g950652" /transl_table=11 /translation="MRPSERGAFRSRLVWLVLFRTVAASLSLVITLARLLLHPSQELN HADTLSLAVIIIAYVSTVVVGLRLRKGQGGLGDAWVQVVGDVVIATGLVYLSGGSDSP LTFLYSLAVIGASVVLDRRGALWAAAASALCFGALVMGSQLLDGASGGLMPPTRVLFV LGSNSLALGLIAVLSGYLSRQLSATGGALSAREADLQRLGRLQQQILSSMPSGLATCD AQRRVTYVNPAGCGILQVDPTQVAGVEVEALLPGVSVLAPRSPRSELVVGKGAKRRIL GLSVTPLEGEPGALLMVFQDLTQLRRMEDDLKRADRLASLGALSAQLAHELRNPLASM RGSAQLLAQDARDDVAQKLTNILMRESDRLARLVEEFLRFARPPVPSLRRVPLASLVT ETMDMLRVDPLARDVRVEVTAPEPLPVSVDPDQLRQVLINLVRNGFLAAGPRGEVKVA LTRSENEARIRIWDSGGSITEEMMGHLFEPFFTTRDGGTGLGLSTAHSIIRAHGGSIR VRSNRDEGTEFVVGLPL" CDS 1794..3206 /gene="pilR" /standard_name="PilR protein" /note="This CDS starts with a CTG codon, selected on the basis of homology to other NtrC-like proteins and because it has a plausible ribosomal binding sequence upstream.; putative" /codon_start=1 /function="homolog to pilR of Pseudomonas aeruginosa, an NtrC-like regulator protein of a two component regulatory system" /product="regulatory protein" /db_xref="PID:g950653" /transl_table=11 /translation="MGSRGHILVVDDELSMREYLELLLQREGYSVTSVASVKAACDVL ALDGVDLVISDLKLGTGSGLDVLRAARARSASPEVVLITAYGTPAAAVEAMREGAYDY ICKPFDNEELRLLVQKALEKRTLRQENSGLRARLFPGLDGAVGQSERMQAVWALVEKV ASGRSTVLVTGESGTGKELVARAIHMRGTRAARPFLPFNCAALNEGTLESELFGHVKG AFTGATTDRSGLLVAAGDGTVMLDEVGEMPLATQVKLLRVLQERKVKPVGSAAEIPFQ ARVIAATNRRLEAEVKAGRFREDLFYRLNVITLELPPLRERSGDVSLLANYFLSRLSE ELGRPGLRFSPETLGLLERYPFPGNVRQLQNMVERAATLSDSDLLGPSTLPPAVRGDT DPAVRPVEGSEPGLVAGFNLERHLDDSERRYLVAAMKQAGGVKTRAAELLGLSFRSFR YRLAKHGLTDDLEPGSASDA" gene 1794..3206 /gene="pilR" gene 3393..4055 /gene="pilA" CDS 3393..4055 /gene="pilA" /standard_name="PilA protein" /codon_start=1 /function="homologous to Type IV prepilins" /evidence=experimental /product="pilin" /db_xref="PID:g950654" /transl_table=11 /translation="MRVSRFNPRNRGFTLIELMIVVAIIGILAAIAIPNFIKFQARSK QSEAKTNLKALYTAQKSFFSEKDRYSDFANEIGFAPERGNRYGYRVSAAAGDCEVRNA ADLPVPAAGVPCISNDSFRFGANSAIDDPTPVVARFVPQGAAGWNTTLGVQPTIADCP NCNFFAGARGNADNEATFDDWVIAGFEGSGQVGPCSEAGNVASGTPYNTRNDVACDGA AQ" BASE COUNT 736 a 1484 c 1580 g 898 t ORIGIN 1 ccatggacac catgctcaac aagatcgccg acttctacga cgacgaggtg gacgcggcca 61 tcaacagcct cacggcgatg attgagccgg tcctcatggt gttcctcggc ggcgtggtcg 121 gtggcttcct catcggcatg tatctgccga tcttctcgct tgccggcgcc atccagtagg 181 tcagcagcgg tgggcgtgcg cccgtcggag aggggcgcct ttcgttcgcg gctcgtgtgg 241 ttggtgttgt tccgcacggt cgccgcgagc ctctcgctcg tcatcaccct ggcgcggctt 301 ctccttcatc cttcccagga gctgaatcac gcggacaccc tgtcgctcgc ggtcatcatc 361 atcgcgtacg tgtcaacggt ggtggtgggg ctgcggctgc gcaaggggca gggggggctc 421 ggggacgcct gggtgcaggt cgtgggcgac gtcgtcatcg ccaccggcct cgtgtacctc 481 agcggtggct ccgactcgcc cctgacgttt ctctacagcc tggccgtcat cggcgcgtcg 541 gtcgtcctgg accgccgagg cgcgctctgg gctgctgctg cgtctgccct gtgtttcggg 601 gccttggtca tgggctcaca actcctggac ggcgcgtctg gtgggttgat gccgcccacg 661 cgggtgctct tcgtcctggg cagcaactcc ctggccctgg gcctcatcgc tgtgctgtcg 721 ggctatctct cacgtcagct ctccgcgaca ggtggcgccc tgtctgctcg cgaggcggac 781 ctccagcgat tggggcggct tcaacagcag attctctcct ccatgccgtc ggggctggcg 841 acgtgtgatg cgcagcgccg cgtgacgtac gtcaatcccg ccggttgcgg aatcctccag 901 gtcgacccca cgcaggtcgc tggcgtcgaa gtcgaagcgc ttcttcctgg cgtttcagtc 961 ctggcgcctc gatctcctcg cagtgaattg gtggtgggaa agggcgcgaa gcggcgcatc 1021 ctggggctgt cggtaacgcc actggagggt gagcccgggg ctttgctcat ggtcttccag 1081 gacctcaccc agctccgccg gatggaggat gacctgaaga gggccgatcg gctcgccagc 1141 ctgggtgcac tctctgcgca actggcgcac gaactgcgca acccgctggc gtccatgcgc 1201 ggctcggcgc agttgttggc gcaggatgca cgggatgacg tggcccagaa gctcaccaac 1261 atcttgatgc gcgagtcgga tcgtctggca cggctcgtcg aggagttcct gcgctttgct 1321 cgtcccccgg tgcccagctt gcggagggtt ccacttgcct cgctcgtgac ggagaccatg 1381 gacatgctcc gggtggatcc actggcacgt gacgtacggg tcgaagtcac cgcgcccgag 1441 cctctcccgg tctcggttga cccggatcag ctgcggcagg tgctcatcaa cctcgtgcgc 1501 aacgggtttc tggccgcagg cccgcgcggt gaggtgaagg tcgcgctgac tcggagcgag 1561 aatgaggcga gaatccgcat ctgggactcg ggggggagca tcacggagga gatgatgggg 1621 cacttgttcg agccgttctt caccacacgc gatggcggca cggggctggg gttgtccacc 1681 gcgcactcca tcatccgggc ccacggaggc tccatccggg tgcgctcgaa ccgtgatgag 1741 gggaccgagt tcgtggtggg gttgccgctg tgacatccgt acagggagga gacctggggt 1801 cgcgcggcca catcctcgtg gtcgatgacg agctgtccat gcgtgagtac ctcgagctgt 1861 tgcttcagcg ggaggggtac tcggtgacga gcgtggccag tgtgaaggcc gcatgtgatg 1921 tgctggccct ggacggagtg gacctggtca tctccgactt gaagctgggc acgggcagtg 1981 gcctcgacgt cctgcgggcg gcccgggccc ggtcggcttc tcccgaggtg gtgctcatca 2041 ctgcctatgg cacgcccgcg gcagcggtcg aagcgatgcg ggaaggcgct tacgactaca 2101 tctgcaagcc cttcgacaac gaggagttgc ggctcctggt gcagaaggcg ctggagaagc 2161 gaacgctccg tcaggagaac agtggtctca gggcgcggct atttcctggc ctggatggcg 2221 cggtgggtca gagcgagcgc atgcaggcgg tctgggcctt ggtggagaaa gtcgcttccg 2281 gccgcagcac ggtgctggtg acgggggaga gcgggacggg caaggaactg gtggcgcggg 2341 ccatccatat gcgcggcact cgagccgcgc gtcccttcct gcccttcaac tgcgcggcgt 2401 tgaacgaggg gacgctggag agcgagctct ttgggcatgt gaagggggca ttcactggcg 2461 cgaccaccga ccgctctggc ctcctggtgg ccgcaggcga tggcaccgtc atgttggacg 2521 aggtcgggga gatgccgctc gcgacgcagg tgaagctgct tcgtgtgctc caggagcgga 2581 aggtgaagcc ggtcggcagc gccgcggaga ttcccttcca ggcgcgtgtc atcgcggcaa 2641 cgaaccggcg gctcgaagcc gaagtaaagg ccggacgctt tcgtgaggac ctcttctacc 2701 ggctcaacgt catcacgttg gagctgcctc cactgcgcga gcgttccggc gacgtgtcgt 2761 tgctggcgaa ctacttcctg tccagactgt cggaggagtt ggggcgaccc ggtctgcgtt 2821 tctcccccga gacactgggg ctattggagc gctatccctt cccaggcaac gtgcggcagc 2881 tgcagaacat ggtggagcgg gccgcgaccc tgtcggattc agacctcctg gggccctcca 2941 cgcttccacc cgcagtgcgg ggcgatacag accccgccgt gcgtcccgtg gagggcagtg 3001 agccagggct ggtggcgggc ttcaacctgg agcggcatct cgacgacagc gagcggcgct 3061 atctcgtcgc ggcgatgaag caggccgggg gcgtgaagac ccgtgctgcg gagttgctgg 3121 gcctttcgtt ccgttcattc cgctaccggt tggccaagca tgggctgacg gatgacttgg 3181 agcccgggag cgcttcggat gcgtaggctg atcgacagtt atcgtcagcg tcactgccga 3241 attttgtcag ccctggaccc atcctcgccg aggggattgt tccaagcctt gagaattggg 3301 gggcttggag tgcgcacctg ggttggcatg cgtagtgcta atcccatccg cgggcgcagt 3361 gccccccgtt gcaaccttct ctgaggaccc ccatgcgcgt ctcgcgattc aacccccgca 3421 accgtggctt cacgctcatc gagctcatga tcgtggtcgc catcatcggc atcctggccg 3481 ccatcgccat cccgaacttc atcaagttcc aggcccgctc gaagcagtcc gaggcgaaga 3541 cgaacctcaa ggcgctgtac accgcgcaga agtcgttctt ctccgagaag gaccgttact 3601 ccgacttcgc caacgaaatc ggcttcgcgc cggagcgcgg caaccgttac ggctaccgtg 3661 tgtccgctgc ggcgggcgat tgcgaggtgc gcaatgcggc tgaccttccg gtgcctgctg 3721 ccggcgttcc gtgcatctcc aacgactcgt tccgcttcgg tgccaacagc gccatcgacg 3781 atccgacccc ggttgtcgcc cgcttcgtgc cccagggcgc tgccgggtgg aacacgaccc 3841 tcggtgtgca gccgaccatc gcagactgcc ccaactgcaa cttcttcgct ggtgcgcgtg 3901 gcaacgcgga caacgaggcg accttcgatg actgggtgat cgccggtttc gagggctctg 3961 gccaggtggg tccgtgctcc gaggcgggta acgttgcctc cggtaccccc tacaacacgc 4021 gcaacgacgt cgcctgcgac ggcgcggccc agtaactcgc attccttcag tggaatgagc 4081 agtggagggt ccactgttct tcgggccgct ctcccccagg agggcggcct ttctcaattc 4141 tacaacccca gggaactcat gcggagcgtc gtgctgtgtc tggctgtttg cgccatcgca 4201 gtgatggcag agaagccggc caagccattg cggacgaagg atgggcccat cctcccccgg 4261 cgagagttcc tcgaaatcgt gggggcggcg cagaagccgc tgttggccga cttctactgg 4321 ctccagtcca tccagcaggt cggccgtgcg aacacggaca cggaataccg ggacgtgttc 4381 ttctacgcgg atctggcgac ggacctcgat cccaagttca ggtacgtcta cgagtggggt 4441 gccatcacca cccccgtcaa cctggggagg gacgaatggg cgaacacgga cctgtcatcc 4501 cggctgctaa gcaaggggct ggttgagttc ccggacgacc gccggttcct gttccaactg 4561 gcctacaaca agatgacgta tgacagggac tacaagacag ctgccgacca gctcatgaag 4621 ttgtcgaagt accctgagac gcccccctat ctgctgcaac tcgccacgcg cctctatgcg 4681 caggctggca gcatcgat //