| Table 1. Feeding response genes | ||||
| A. Functional classes | ||||
| Fold enrichment | Number in | |||
| Total on | in Feeding | Feeding | ||
| Gene classa | Array | responseb | response | Referencec |
| Total number of gene | 17761 | 446 | ||
| Nuclear: nucleolus | 23 | 13.7 | 8 | |
| tRNA Synthetase Genes | 30 | 9.2 | 7 | |
| Translation Factors | 43 | 9.2 | 10 | |
| RNA Processing/Modification | 71 | 6.7 | 12 | |
| Endoplasmic Reticulum | 63 | 4.4 | 7 | |
| Mitochondrial | 179 | 4.2 | 19 | |
| Protein Expression | 390 | 3.9 | 39 | Kim et al., 2001 |
| RNA Binding | 151 | 3.4 | 13 | |
| Germ Line-Enriched | 508 | 2.5 | 32 | Reinke et al., 2000 |
| Biosynthesis | 478 | 2.4 | 29 | Kim et al., 2001 |
| Muscle Expressed Genes | 1329 | 2.1 | 70 | P. Roy et al., 2002 |
| Worm-Yeast Orthologs | 1921 | 1.9 | 94 | Kim et al., 2001 |
| B. Gene expression mountains | ||||
| Fold enrichment | Number in | |||
| Total on | in Feeding | Feeding | ||
| Gene classa | Array | responseb | response | Commentsd |
| Genome | 17761 | 446 | ||
| Mount 41 | 7 | 11.3 | 2 | protein expression |
| Mount 40 | 8 | 14.8 | 3 | protein expression |
| Mount 20 | 160 | 11.4 | 46 | germ line, biosynthesis, protein expression, heat shock |
| Mount 18 | 190 | 4.6 | 22 | germ line, oocyte, biosynthesis, protein synthesis |
| Mount 05 | 978 | 2.3 | 56 | |
| Mount 02 | 1465 | 2.2 | 80 | germ line, oocyte, operons |
| aOver-represented functional classes in the feeding response gene groups. For clarity, gene groups with p>0.001 are | ||||
| not listed. See Supplemental Data for full comparisons. Gene lists are shown in Supplemental Table [5]. | ||||
| bAll representation factors are significant at p<0.001. The probability was determined using the normal | ||||
| approximation of the hypergeometric probability distribution. | ||||
| cFunctional classes are from Proteome except where noted. | ||||
| dFunctional groups over-represented in the mountains (Kim et al., 2001) | ||||