Predicted attenuators in bacteria


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Orthologous genes that have a predicted attenuator in COGs families
Genes that have a predicted Aminoacyl-tRNA-synthetase T-box.
Genes that have a predicted Cobalamin riboswitch.
Genes that have a predicted Glycine cleavage
Genes that have a predicted Guanine G-box
Genes that have a predicted Lysine_riboswitch
Genes that have a predicted Methionine S-box
Genes that have a predicted Riboflavin rfn-box
Genes that have a predicted Thiamine Thi-box

Or select one of the full-sequenced genomes listed bellow:

Aeropyrum pernix A pernix
Acinetobacter sp Acinetobacter sp
Agrobacterium tumefaciens A tumefaciens C58 Cereon circular
A tumefaciens C58 Cereon linear
A tumefaciens C58 Cereon plasmid AT
A tumefaciens C58 Cereon plasmid Ti
A tumefaciens C58 UWash circular
A tumefaciens C58 UWash linear
A tumefaciens C58 UWash plasmid AT
A tumefaciens C58 UWash plasmid Ti
Aquifex aeolicus A aeolicus
A aeolicus plasmid ece1
Archaeoglobus fulgidus A fulgidus
Bacillus anthracis B anthracis A2012
B anthracis A2012 pl-pXO1
B anthracis A2012 pl-pX2
B anthracis Ames
B anthracis Ames 0581
B anthracis Ames 0581 pl-pXO1
B anthracis Ames 0581 pl-pXO2
B anthracis str Sterne
Bacillus cereus B cereus ATCC 10987
B cereus ATCC14579
B cereus ATCC14579 plasmid-pBClin15
Bacillus halodurans B halodurans
Bacillus subtilis B subtilis
Bacillus thuringiensis konkukian B thuringiensis konkukian
Bacteroides thetaiotaomicron B thetaiotaomicron VPI-5482
Bartonella henselae Houston-1 B henselae Houston-1
Bartonella quintana Toulouse B quintana Toulouse
Bdellovibrio bacteriovorus B bacteriovorus
Bifidobacterium longum B longum
Blochmannia floridanus B floridanus
Bordetella bronchiseptica B bronchiseptica
Bordetella parapertussis B parapertussis
Bordetella pertussis B pertussis
Bradyrhizobium japonicum B japonicum
Borrelia burgdorferi B burgdorferi
B burgdorferi plasmid-cp26
B burgdorferi plasmid-cp32-1
B burgdorferi plasmid-cp32-3
B burgdorferi plasmid-cp32-4
B burgdorferi plasmid-cp32-6
B burgdorferi plasmid-cp32-7
B burgdorferi plasmid-cp32-8
B burgdorferi plasmid-cp32-9
B burgdorferi plasmid-cp9
B burgdorferi plasmid-lp17
B burgdorferi plasmid-lp21
B burgdorferi plasmid-lp25
B burgdorferi plasmid-lp28-1
B burgdorferi plasmid-lp28-2
B burgdorferi plasmid-lp28-3
B burgdorferi plasmid-lp28-4
B burgdorferi plasmid-lp36
B burgdorferi plasmid-lp38
B burgdorferi plasmid-lp54
B burgdorferi plasmid-lp56
Brucella melitensis B melitensis I
B melitensis II
Brucella suis 1330 B suis 1330 I
B suis 1330 II
Buchnera aphidicola Sg Buchnera aphidicola Sg
Buchnera sp. APS Buchnera sp
Buchnera sp pl-pLeu
Buchnera sp pl-pTrp
Campylobacter jejuni C jejuni
Candidatus Blochmannia floridanus C Blochmannia floridanus
Caulobacter crescentus C crescentus
Chlamydia muridarum C muridarum
C muridarum pl-pMoPn
Chlamydia trachomatis C trachomatis
Chlamydophila caviae C caviae
C caviae pl-pCpGP1
Chlamydophila pneumoniae C pneumoniae AR39
C pneumoniae CWL029
C pneumoniae J138
C pneumoniae TW-183
Chlorobium tepidum C tepidum
Clostridium acetobutylicum C acetobutylicum
C acetobutylicum plasmid-pSOL1
Clostridium perfringens C perfringens
C perfringens plasmid-pCP13
Clostridium tetani E88 C tetani E88
Corynebacterium efficiens C efficiens
Corynebacterium diphtheriae C diphtheriae
Corynebacterium glutamicum C glutamicum
Coxiella burnetii C burnetii
Chromobacterium violaceum C violaceum
Deinococcus radiodurans D radiodurans 1
D radiodurans 2
D radiodurans pl-CP1
Desulfotalea psychrophila D psychrophila LSv54_l1
D psychrophila LSv54_l2
D psychrophila LSv54_l3
Desulfovibrio vulgaris Hildenborough D vulgaris Hildenborough l1
D vulgaris Hildenborough l2
D vulgaris Hildenborough l3
Enterococcus faecalis V583 E faecalis V583
Escherichia coli E coli CFT073
E coli K12
E coli O15H7
E coli O15H7 pl-pO157
E coli O15H7 pl-pOSAK1
E coli O157 EDL933
Fusobacterium nucleatum F nucleatum
Erwinia carotovora atroseptica SCRI1043 Erwinia carotovora atroseptica SCRI1043
Geobacter sulfurreducens G sulfurreducens
Gloeobacter violaceus G violaceus
Haemophilus ducreyi H ducreyi
Haemophilus influenzae Rd H influenzae
Halobacterium sp. NRC-1 Halobacterium sp
Halobacterium sp plasmid-pNRC100
Halobacterium sp plasmid-pNRC200
Helicobacter hepaticus H hepaticus
Helicobacter pylori H pylori 26695
H pylori J99
Lactobacillus johnsonii L johnsonii NCC_533
Lactobacillus plantarum L plantarum
Lactococcus lactis subsp. lactis L lactis
Leifsonia xyli xyli CTCB0 L xyli xyli CTCB0
Leptospira interrogans L interrogans I
L interrogans II
L interrogans serovar Copenhageni l1
L interrogans serovar Copenhageni l2
Listeria innocua L innocua
L innocua plasmid-pLI100
Listeria monocytogenes L monocytogenes
L monocytogenes 4b F2365
Mesoplasma florum M florum_L1
Mesorhizobium loti M loti
M loti plasmid-pMLa
M loti plasmid-pMLb
Methanobacterium thermoautotrophicum M thermoautotrophicum
Methanococcus jannaschii M jannaschii
M jannaschii extra-chromosomal-large
M jannaschii extra-chromosomal-small
Methanococcus maripaludis M maripaludis
Methanopyrus kandleri M kandleri
Methanosarcina acetivorans M acetivorans
Methanosarcina mazei M mazei
Mycobacterium avium paratuberculosis M avium paratuberculosis
Mycobacterium bovis M bovis
Mycobacterium leprae M leprae
Mycobacterium tuberculosis M tuberculosis CDC1551
M tuberculosis H37Rv
Mycoplasma gallisepticum M gallisepticum
Mycoplasma genitalium M genitalium
Mycoplasma mobile M mobile
Mycoplasma mycoides M mycoides
Mycoplasma penetrans M penetrans
Mycoplasma pneumoniae M pneumoniae
Mycoplasma pulmonis M pulmonis
Neisseria meningitidis N meningitidis MC58
N meningitidis Z2491
Nanoarchaeum equitans N equitans
Nitrosomonas europaea N europaea
Nostoc sp. Nostoc sp
Nostoc sp plasmid-pCC7120alpha
Nostoc sp plasmid-pCC7120beta
Nostoc sp plasmid-pCC7120delta
Nostoc sp plasmid-pCC7120epsilon
Nostoc sp plasmid-pCC7120gamma
Nostoc sp plasmid-pCC7120zeta
Oceanobacillus iheyensis O iheyensis
Onion yellows phytoplasma O yellows phytoplasma
Parachlamydia sp Parachlamydia sp
Pasteurella multocida P multocida
Photorhabdus luminescens P luminescens
Pirellula_sp Pirellula_sp
Picrophilus torridus P torridus DSM 9790
Porphyromonas gingivalis P gingivalis
Propionibacterium acnes P acnes KPA171202
Prochlorococcus marinus P marinus CCMP1375
P marinus MED4
P marinus MIT9313
Pseudomonas aeruginosa P aeruginosa
Pseudomonas putida P putida KT2440
Pseudomonas syringae P syringae
P syringae plasmid-pDC3000A
P syringae plasmid-pDC3000B
Pyrobaculum aerophilum P aerophilum
Pyrococcus abyssi P abyssi
Pyrococcus furiosus P furiosus
Pyrococcus horikoshii P horikoshii
Ralstonia solanacearum R solanacearum
R solanacearum pl-pGMI1000MP
Rickettsia conorii R conorii
Rickettsia typhi wilmington R typhi wilmington
Rickettsia prowazekii R prowazekii
Rhizobium etli R etli
R etli pl-A
R etli pl-B
R etli pl-C
R etli pl-E
R etli pl-F
R etli pl-p42d
Rhodopseudomonas palustris R palustris CGA009
Salmonella typhi S typhi_l1
S typhi l2
S typhi l3
S typhi Ty2
Salmonella typhimurium LT2 S typhimurium LT2
S typhimurium LT2 plasmid-pSLT
Shigella flexneri 2a S flexneri 2a
S flexneri 2a_2457T
Shewanella oneidensis S oneidensis
S oneidensis pl-pMR-1
Sinorhizobium meliloti S meliloti
S meliloti plasmid-pSymA
S meliloti plasmid-pSymB
Staphylococcus aureus S aureus aureus MRSA252
S aureus aureus MSSA476
S aureus Mu50
S aureus Mu50 plasmid-VRSAp
S aureus MW2
S aureus N31
S aureus N31 pl-pN315
Staphylococcus epidermidis S epidermidis ATCC 12228
Streptococcus agalactiae S agalactiae 2603
S agalactiae NEM316
Streptococcus mutans S mutans
Streptococcus pneumoniae S pneumoniae R6
S pneumoniae TIGR4
Streptococcus pyogenes S pyogenes MGAS315
S pyogenes MGAS8232
S pyogenes SSI-1
Streptomyces avermitilis S avermitilis
S avermitilis pl-SAP1
Streptomyces coelicolor S coelicolor
S coelicolor plasmid-SCP1
S coelicolor plasmid-SCP2
Sulfolobus solfataricus S solfataricus
Sulfolobus tokodaii S tokodaii
Synechococcus sp Synechococcus_sp
Synechocystis PCC6803 Synechocystis PCC6803
Thermus thermophilus T thermophilus
T thermophilus pl-pTT27
Thermoanaerobacter tengcongensis T tengcongensis
Thermoplasma acidophilum T acidophilum
Thermoplasma volcanium T volcanium
Thermosynechococcus elongatus T elongatus
Thermotoga maritima T maritima
Treponema denticola Treponema denticola
Treponema pallidum T pallidum
Tropheryma whipplei T whipplei TW08 27
T whipplei twist
Ureaplasma urealyticum U urealyticum
Vibrio cholerae V cholerae I
V cholerae II
Vibrio parahaemolyticus V parahaemolyticus I
V parahaemolyticus II
Vibrio vulnificus CMCP6 V vulnificus CMCP6 I
V vulnificus CMCP6 II
V vulnificus YJ016 I
V vulnificus YJ016 II
V vulnificus YJ016 pl-pYJ016
Wigglesworthi brevipalpis W brevipalpis
Wolbachia pipientis wMel W pipientis wMel
Wolinella succinogenes Wolinella succinogenes
Xanthomonas axonopodis citri X axonopodis citri
Xanthomonas campestris X campestris
Xylella fastidiosa X fastidiosa
X fastidiosa_pl-pXF1
X fastidiosa pl-pXF51
X fastidiosa Temecula1
Yersinia pestis Y pestis biovar Mediaevails
Y pestis biovar Mediaevails pl-pCD1
Y pestis biovar Mediaevails pl-pCRY
Y pestis biovar Mediaevails pl-pMT1
Y pestis biovar Mediaevails pl-pPCP1
Y pestis CO92
Y pestis CO92 plasmid-pCD1
Y pestis CO92 plasmid-pMT1
Y pestis CO92 plasmid-pPCP1
Y pestis KIM
Updated: November 2004