Gene putatively regulated by attenuation in Acinetobacter_sp_ADP1

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:186 nt.     Distance to run of Ts=0 nt.   Size=20 nt.     Delta G=-14.30 kcal/mol
Antiterminator: Size=35 nt.     Delta G= -3.00 kcal/mol
Anti-antiterminator:   Size=52 nt.     Delta G= -8.00 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
Bases shared by the anti-antitermination and antitermination structures are shown in green
The sequences of the anti-antiterminator, antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

ATATTGGCTTGAAAAACAACTACGTTTAATTGAGTTAATGGGTTTACAAAATTATATT
CAGTCTCAAATGTAAgctaattattgacaaaagactcagcttcggctgagttttttatgcatattattttttgagattttaactagata
tcatttcaagatgtttgatgaagtggtgatttaaatacattgttttaagccgtgctattttttttatttttcagtattatgttttcgaaatatctagctt
tattaaattgttaaataaaaaaatgtggcaatccagatggctacctcaggagtATG

    ACIAD0853


Gene: ACIAD0853     GI: 50084065     BI number: ACIAD0853     GOG: -------     Description: hypothetical protei


 AA
A  A
C  T
 AT
 TA
T  T
 TA
 GT
 GT
 GC         t
 TA       c  a
A  G      g  a
A  T       At
T  |       At
T  |       Ta
 GC        Gt
 AT       |  t
 GC       |  g
 TA       T  a       tc
 TA       A  c      t  g
|  A      A  a       cg
|  T      A  a       gc
A  G      C  a       at
 AT        Ta        cg
 TA        Cg        ta
 TA        Ta        cg
 Tg        Gc        at
 Gc        At        gt
                        ttttatgcatattattttttgagattttaactagatatcatttcaagatgtttgatgaagtggtgatttaaatacattgttttaagccgtgctattttttttatttttcagtattatgttttcgaaatatctagctttattaaattgttaaataaaaaaatgtggcaatccagatggctacctcaggagtATG
    ..................................................................................................................