Gene putatively regulated by attenuation in Acinetobacter_sp_ADP1
Characteristics of the secondary structures
Terminator: Distance to gene:122 nt. Distance to run of Ts=0 nt. Size=19 nt. Delta G= -7.30 kcal/mol
Antiterminator: Size=76 nt. Delta G= -3.10 kcal/mol
Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case
GCTTCCAAGCTTGGGTCGATCAACTCTGGCTTGAAAAAGATCAACTCATCGGGCAAAT
GAAAGCCAAATACGCCGTTTCATCCTCTTAAgttagccattttaactatgcagaacagttcaaaaaatcagactaaa
tatcatcacctggatccaaatagcttgtcattcaagctatttttgatctatgacatttttatggtctttattattatctttaacctgttctgcttatgtg
ccaacttttttttgatgagcaacataggcagttggttctttgatcatatccgcctaaattttgtcTTG
ACIAD0896
Gene: ACIAD0896 GI: 50084106 BI number: ACIAD0896 GOG: ------- Description: hypothetical protein; putative membrane protei
aa
a a
a t
a c
c a
tg
ta
gc
at
c a
a a
a a
g t
a a
c t
gc
ta
at
t c
c a
a c
a c
t t
tg
tg
ta
at
| c
| c
c a a
c a c t
g a t t
at gc
ta ta
tg ta
gc cg
At gc
At at
Tg ta
tttttgatctatgacatttttatggtctttattattatctttaacctgttctgcttatgtgccaacttttttttgatgagcaacataggcagttggttctttgatcatatccgcctaaattttgtcTTG
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