                                                                        Gene putatively regulated by attenuation in Acinetobacter_sp_ADP1

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:166 nt.     Distance to run of Ts=1 nt.   Size=37 nt.     Delta G= -9.40 kcal/mol
Antiterminator: Size=37 nt.     Delta G= -4.20 kcal/mol
Anti-antiterminator:   Size=43 nt.     Delta G=-10.36 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
Bases shared by the anti-antitermination and antitermination structures are shown in green
The sequences of the anti-antiterminator, antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

GATAGGCGCTGAACATTCGGCATGCTTGGAATATCCTGGCGCTGGTTTTGCCCTGGCA
ATACAAATACTGGATAAATGAGATGATGAGGCGTCAGTTGTGTTTCACTGACCATTGC
TCGCAATTGATCATTTTTACGGATACGGCGCATACGCGTTGCGGGAAAAGCAGGACGA
TTGAACGTATAAGTCATAACAATCTCAATGTTCAGTATTAAACTTGTGGGGTATTGTA
GACCCATcactgggcatttgtacaagcagaattggctttaatgcagatttatcaacgttgagtattttATG

    ACIAD0924 Gene: ACIAD0924     GI: 50084132     BI number: ACIAD0924     GOG: -------     Description: conserved hypothetical protei CT C  G CG         G GC       A  G       AC TA        GC       G  C TA        TG       T  A T  T       AT       C  T TA        GC        AT GC        TA        CG G  A      A  G      T  C T  A      G  |      T  T C  A       AT       T  | G  T       GT        GC C  A       TG        TG G  C       AT        GC G  T      A  G       TA T  |      A  T       TA CG       T  |       GT CG        AT        AT TA        GT        CG AT        GC        TA TA        TA        GT                         CATTTTTACGGATACGGCGCATACGCGTTGCGGGAAAAGCAGGACGATTGAACGTATAAGTCATAACAATCTCAATGTTCAGTATTAAACTTGTGGGGTATTGTAGACCCATcactgggcatttgtacaagcagaattggctttaatgcagatttatcaacgttgagtattttATG     ..................................................................................................................