Gene putatively regulated by attenuation in Acinetobacter_sp_ADP1
Characteristics of the secondary structures
Terminator: Distance to gene:201 nt. Distance to run of Ts=1 nt. Size=35 nt. Delta G=-10.10 kcal/mol
Antiterminator: Size=47 nt. Delta G= -7.80 kcal/mol
Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case
AGCTTATTTGTACCCGCCATCCAAAAAATCGGCGTCAAATAACATCGTAAGGCAAGTG
CTGCGATACCATCTGCATGTTTAAGCAGGGTGCAGGTGTTTTGATAGCATTGAGCCAG
AGAATGCAAAATGTTCTTCATgataacttcacaccgaatgagattgaatgatcattagtcggataaagcgtcagtttcttacaca
aacttttttttatttgcactgtaataaattgagatttgcgccgtctaactttatgtacctctgtacaaaccgagtatttaccttaaaaggaatagaaaaA
TG

ACIAD0932
Gene: ACIAD0932 GI: 50084139 BI number: ACIAD0932 GOG: ------- Description: conserved hypothetical protei
AG
A T
CG
GC
GT
A | TT
A | G T
TG T A
GC A A
CG CG
TA GC
AT TA
C A CG
A C TG
A C A G
TA C |
AT C |
A C A |
AT T |
CG A |
| C GT
TA CG
GT GC
CG TA
GT CG
GTGTTTTGATAGCATTGAGCCAGAGAATGCAAAATGTTCTTCATgataacttcacaccgaatgagattgaatgatcattagtcggataaagcgtcagtttcttacacaaacttttttttatttgcactgtaataaattgagatttgcgccgtctaactttatgtacctctgtacaaaccgagtatttaccttaaaaggaatagaaaaATG
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