                                                                        Gene putatively regulated by attenuation in Acinetobacter_sp_ADP1

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:143 nt.     Distance to run of Ts=2 nt.   Size=21 nt.     Delta G= -8.00 kcal/mol
Antiterminator: Size=39 nt.     Delta G= -6.50 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

GTGCACAAAGTATAGATGTTCGTTATTTTAGCTTACAAGGCCAGTTGATTGAACAGCG
CTTTCATGGCTTTCCTGCACGTATTGTGCAACATGAAATTGATCATCTCAATGGCGTA
CTATTTGTCGACAGATTGATTTAAtctgtctggtttttttgcttagagagtttgcccaatgtgttgtttagagaactaaagt
agtaaaacaaatcgctatattacaaaagacctgattttagtattataaattcgctgtaccatcaaaattaaaataaactcgaaaaattgaaggtttagcc
ttATG

    ACIAD1040 Gene: ACIAD1040     GI: 50084242     BI number: ACIAD1040     GOG: COG2066     Description: putative glutaminas   T C  A A  T T  T GT CG GT GC TG A  A A  C        T C  |      A  T TA        GT CG        TA TA        TA |  T       At AT        Gc CG        At TA        Cg AT        At GT        Gc             tggtttttttgcttagagagtttgcccaatgtgttgtttagagaactaaagtagtaaaacaaatcgctatattacaaaagacctgattttagtattataaattcgctgtaccatcaaaattaaaataaactcgaaaaattgaaggtttagccttATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [E] COG2066 Glutaminase ... can be seen here     ..................................................................................................................