Gene putatively regulated by attenuation in Acinetobacter_sp_ADP1
Characteristics of the secondary structures
Terminator: Distance to gene:49 nt. Distance to run of Ts=0 nt. Size=18 nt. Delta G=-13.20 kcal/mol
Antiterminator: Size=48 nt. Delta G= -3.55 kcal/mol
Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case
CGTGGTGGAATCAAACTTGTCTTTATCCCGCAAGATAACGTGCGTGATTTGGCTGAAA
TACCAGACAATGTTAAAGAGGGTTTAGAAATCAAAGCAGTGAAAAGCATTGATGAAAT
CTTACCTTTAGCTTTGACAGAACAGCCTAAACCATTGGCCAAAGCACCAATTGTTAAG
CCTGTAGAAGAGTCAAAAGCGGCACGTCATTGAtgtagtaaaaatccaataaaaaagagagcttcggctctctttt
ttacatttataaggttgaaaaatgatcaattatctccataataatattatATG
ACIAD1114
Gene: ACIAD1114 GI: 50084308 BI number: ACIAD1114 GOG: ------- Description: hypothetical protei
T
A T
CG
TA
Gt
Cg
At
| a
Cg
Gt
| a
| a
| a
| a
| a
| t
| c
| c
| a
| a
| t
| a
| a
| a
| a
| a
| a tc
| g t g
| a cg
| g gc
G a at
Cg gc
Gc at
At gc
At at
tttttacatttataaggttgaaaaatgatcaattatctccataataatattatATG
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