                                                                        Gene putatively regulated by attenuation in Acinetobacter_sp_ADP1

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:119 nt.     Distance to run of Ts=0 nt.   Size=36 nt.     Delta G=-15.00 kcal/mol
Antiterminator: Size=68 nt.     Delta G= -9.10 kcal/mol
Anti-antiterminator:   Size=56 nt.     Delta G=-16.00 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
Bases shared by the anti-antitermination and antitermination structures are shown in green
The sequences of the anti-antiterminator, antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

TGGAAGAGCGTAAACGTAAGGTTTCTAAAGCCCTGAAAGTTTATGCTATGCATACAAC
AAGCGCAGCGAAAGGTGCGGTACGCATATTATAAatgatcatgaatagataaaattaatttcaattttttctatt
taacctgtaatttctttgtagatatgcattgagattacaggtttttttatgactgatgagatgaatcacttgttatctgagagatcagtttgaatattgc
ggtttaatctaaatattgttaatttaaatgtaaatgataataaacataaatatggacaattaaaaggATG

    ACIAD1267 Gene: ACIAD1267     GI: 50084453     BI number: ACIAD1267     GOG: -------     Description: hypothetical protein; putative signal peptid            tt           a  t           a  c            ta            ta            at            at            at GA        at C  A      t  t G  A       at A  G       gc CG        at GT        ta CG        at GC        at A  G       gt A  |       ta C  |      |  a A  |      |  c A  |      |  c       at CG        at       g  a AT        cg        at TA       |  t       tg A  C      |  a       gc CG       |  a       ta GC       |  t      t  t TA       t  t      t  t AT        at        cg TA        gc        ta C  T      t  |       tg GT        at        ta TA        At        at AT        At        at TA        Tg        ta TA        At        gc Ta        Ta        ta Gt        Tg        cg                         gtttttttatgactgatgagatgaatcacttgttatctgagagatcagtttgaatattgcggtttaatctaaatattgttaatttaaatgtaaatgataataaacataaatatggacaattaaaaggATG     ..................................................................................................................