Gene putatively regulated by attenuation in Acinetobacter_sp_ADP1
Characteristics of the secondary structures
Terminator: Distance to gene:108 nt. Distance to run of Ts=0 nt. Size=31 nt. Delta G=-11.80 kcal/mol
Antiterminator: Size=35 nt. Delta G= -3.00 kcal/mol
Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case
GCACATCGCGGTGAAGAAATCTCTGAAAATATGCTAGATCACAAGAACTCCGTGGTTT
GGGATGAAGCAGAAAATCGGCTCCATGCACAGAAAGCATTGATGGAATTTTTATTAAA
TGAAAATGCCAAAAGAGCCTAAaatctttttaaacattttaaaaagcccctagccaagcactatgggcttttttatttcataac
gtctttataataatccaaaatcaatatattcatacgaagtttactgatacattaagtctaaatagatcattttataaaatgagaaaatatgaaaataaaa
ATG

ACIAD1365
Gene: ACIAD1365 GI: 50084544 BI number: ACIAD1365 GOG: ------- Description: conserved hypothetical protein; putative esterase/lipas
a
c t
at a
at a g
at c c
ta c a
ta gc
ta at
ta ta
ta c t
cg cg
t c cg
a c cg
a c gc
A c at
At at
Ta at
Cg at
ttatttcataacgtctttataataatccaaaatcaatatattcatacgaagtttactgatacattaagtctaaatagatcattttataaaatgagaaaatatgaaaataaaaATG
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