Gene putatively regulated by attenuation in Acinetobacter_sp_ADP1

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:208 nt.     Distance to run of Ts=3 nt.   Size=29 nt.     Delta G= -7.60 kcal/mol
Antiterminator: Size=38 nt.     Delta G= -6.10 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

ATATTGATATTGGGGTGGGACATTTTATTTTAGCCAGTAACCCGCATTTAGAAGAGGC
TTACAGGGTAGCTGAAGAAGTCTTACCTTTATTAAGATATATGTAAaaatcataaacttagatctc
tttgcgatatcaaagagatcttgttgtttgaacaacataacaatgtctgaaaatcaacattttttatattaaatatctgaaagatgtgagttaaatctat
aaaaaataatagcttactattttggcatagcttgtgcaatttctcagtcaatattttatttttagtttaagttcctATG

    ACIAD1528 --- ACIAD1529 --- ACIAD1530


Gene: ACIAD1528     GI: 50084694     BI number: ACIAD1528     GOG: -------     Description: putative tonB-like protein
Gene: ACIAD1529     GI: 50084695     BI number: ACIAD1529     GOG: -------     Description: putative biopolymer transport protein (ExbB-like)
Gene: ACIAD1530     GI: 50084696     BI number: ACIAD1530     GOG: -------     Description: putative biopolymer transport protein (ExbD-like


 TA
T  G
T  A
A  A        T
C  G      G  A
G  A      G  G
 CG        GC
 CG        AT
C  C       CG
 AT       |  A
 AT       |  A
 TA       A  G
 GC        TA
A  A       TA
 CG        CG
 CG        GT
G  G       GC
 AT        AT
 TA        GT
            ACCTTTATTAAGATATATGTAAaaatcataaacttagatctctttgcgatatcaaagagatcttgttgtttgaacaacataacaatgtctgaaaatcaacattttttatattaaatatctgaaagatgtgagttaaatctataaaaaataatagcttactattttggcatagcttgtgcaatttctcagtcaatattttatttttagtttaagttcctATG
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