                                                                        Gene putatively regulated by attenuation in A_tumefaciens_C58_UWash_linear

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:19 nt.     Distance to run of Ts=0 nt.   Size=28 nt.     Delta G=-18.50 kcal/mol

                                                                        Nomenclature/Definitions

TGGTTTAACGCCACCAAGGGCTTCGGCTTCATTCAGCCTGACAACGGCGGCACGGACG
TTTTCGTTCACATTTCTGCTGTTGAGCGCGCTGGCATGCGTTCGCTGAACGACGGCCA
GAAGATCAGCTATGAGATCGTTCAGGACCGCCGGTCCGGAAAAAGCTCTGCCGATAAC
CTTCAGGCAGCTTGAtattcgtcattttggccccgcagaccacggatgtactggctgcaggtgcaaatgactgtgagaggtcgggtaaa
agcccggccttttgtttttgggccatggaggtccttaATG

    Atu3122 --- rpsU --- Atu3124 Gene: Atu3122     GI: 17936833     BI number: Atu3122     GOG: -------     Description: cold shock protein Gene: rpsU     GI: 17936834     BI number: Atu3123     GOG: COG0828     Description: 30S ribosomal protein S21 Gene: Atu3124     GI: 17936835     BI number: Atu3124     GOG: -------     Description: hypothetical protei           aa          a  a           tg           gc           gc           gc           cg           tg           gc           gc           at           gt           at           gt             gtttttgggccatggaggtccttaATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [J] COG0828 Ribosomal protein S21 ... can be seen here     ..................................................................................................................