Gene putatively regulated by attenuation in A_aeolicus

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:114 nt.     Distance to run of Ts=0 nt.   Size=17 nt.     Delta G= -8.40 kcal/mol
Antiterminator: Size=13 nt.     Delta G= -4.10 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

CGAGTTTATTTAAAGTCATAGCAAAGAGGGCTATAGCCTTTTGTTCTCCCACTGCAAG
GAGTGTGTCCATCTCCCTTTCCGGGGGTCTTGGGTGTACTTTTTTGGCGAGTTCTATT
AAAGAGTCAGTCTCTCCAGCCATTGCGGAAGAAACAACAACGGGTTTGTAGCCCTTTT
CAAGGGCTTTTATTACTCTCTTTGCACAAAGTTCTATCCTCTCTAGGGTTCCCACGGA
GGTTCCGCCGAACTTCTGAACGAGTATTTTCATcggaaagtaatattttaccttaaaatttattaattATG

    metK


Gene: metK     GI: 15606406     BI number: aq_1154     GOG: COG0192     Description: S-adenosylmethionine synthetas



            T
          T  C
  G        TA
T  T       TA
T  A       CG
 TG        CG
 GC        CG
 GC        GC
 GC        AT
            TTTATTACTCTCTTTGCACAAAGTTCTATCCTCTCTAGGGTTCCCACGGAGGTTCCGCCGAACTTCTGAACGAGTATTTTCATcggaaagtaatattttaccttaaaatttattaattATG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[H] COG0192 S-adenosylmethionine synthetase ... can be seen here

    ..................................................................................................................