Gene putatively regulated by attenuation in B_anthracis_Ames

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:82 nt.     Distance to run of Ts=0 nt.   Size=30 nt.     Delta G=-16.40 kcal/mol

                                                                        Nomenclature/Definitions

ATGGAGAAGAGTTAAAAATATCTTTTAGTGCAAAATATATGATGGATGCACTAAAGGC
ATTAGATAGTACTGAAATTAAGATTAGCTTTACTGGAGCAATGAGACCATTCTTAATT
CGTACGGTAAATGATGAATCCATTATTCAATTAATTTTACCGGTTCGTACTTACTAAg
taagaaataagggttgctagttttcagatgctagtagcccttatttgatttttgggtattactttcctaatgctagtttatttagtacaatgaaagaatg
aacactttcagaaagtgagcgattttATG

   ف --- BA0003 --- recF


Gene: BA0003     GI: 30260198     BI number: BA0003     GOG: COG2501     Description: conserved hypothetical protein
Gene: recF     GI: 30260199     BI number: BA0004     GOG: COG1195     Description: DNA replication and repair protein RecF
Gene: gyrB     GI: 30260200     BI number: BA0005     GOG: COG0187     Description: DNA gyrase, B subuni


          ca
         t  g
         t  a
         t  t
          tg
          gc
          at
          ta
          cg
          gt
          ta
          tg
          gc
          gc
          gc
            ttatttgatttttgggtattactttcctaatgctagtttatttagtacaatgaaagaatgaacactttcagaaagtgagcgattttATG


                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[S] COG2501 Uncharacterized conserved protein ... can be seen here
[L] COG1195 Recombinational DNA repair ATPase (RecF pathway) ... can be seen here
[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit ... can be seen here

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