Gene putatively regulated by attenuation in B_anthracis_Ames
Characteristics of the secondary structures
Terminator: Distance from promoter:105 nt. Distance to gene:97 nt. Distance to run of Ts=0 nt. Size=29 nt. Delta G=-18.00 kcal/mol
Nomenclature/Definitions
The most likely promoter is: TTGGGT-TACAAT. It has a score value of 60.91 and is shown in blue
TTGGGTTTATCTTCTATCCAATTACAATGGTAGTAAGTGGTCGACGTAAAGAGATTCA
TCCAATTATGTATGTTATGGGAGTTTTATTCGTACTATATTTCATTTATGTTCGTAAA
TAAaaggggtttttgaaaggtctagacttaaggggagtctagaccttttttgcgtcttcagaaaaacttaaggatttccgagcgtttttcttcagaag
ttttcctataatagaagttagggattaaaaaagtaatgggggagatattGTG
BA0271 --- BA0272
Gene: BA0271 GI: 30260446 BI number: BA0271 GOG: ------- Description: DNA-binding response regulator
Gene: BA0272 GI: 30260447 BI number: BA0272 GOG: ------- Description: sensor histidine kinas
g
a g
a g
tg
ta
cg
at
gc
at
ta
cg
ta
gc
gc
at
tttttgcgtcttcagaaaaacttaaggatttccgagcgtttttcttcagaagttttcctataatagaagttagggattaaaaaagtaatgggggagatattGTG
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