                                                                        Gene putatively regulated by attenuation in B_anthracis_Ames_0581

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:157 nt.     Distance to run of Ts=0 nt.   Size=40 nt.     Delta G=-16.50 kcal/mol
Antiterminator: Size=43 nt.     Delta G= -6.30 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

aattcctcacctatttttcataaaaccgctatttttgaccttttataaatatacccctatgtttttataattatttcccgaatttaaatgcctataaaaa
caccaaataaatcttttaaataaagggttcgtttggtgttttttaagttattaaaatatatccctgatttcatatacccaatacctatataaggtatacg
gatggtttttttatcaacgttttctacattatgtaaatttgtacttgcctacacaatggaaatatggtgtaatgcaaaaaaagataaaggattttaaaca
ATG

    GBAA0600 Gene: GBAA0600     GI: 47525879     BI number: GBAA0600     GOG: COG0398     Description: membrane protein, putativ   a g  a c  t       aa c  t      a  t c  t       ta ta        ta ta        ta ta        tg at        cg tg        tg t  c       at a  c       at at       a  c ta       t  g at        at ta        at ta        at ta        cg ta        cg ta        at gc        cg ta        at             tttttaagttattaaaatatatccctgatttcatatacccaatacctatataaggtatacggatggtttttttatcaacgttttctacattatgtaaatttgtacttgcctacacaatggaaatatggtgtaatgcaaaaaaagataaaggattttaaacaATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [S] COG0398 Uncharacterized conserved protein ... can be seen here     ..................................................................................................................