                                                                        Gene putatively regulated by attenuation in B_anthracis_str_Sterne

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:191 nt.     Distance to run of Ts=0 nt.   Size=26 nt.     Delta G=-10.00 kcal/mol
Antiterminator: Size=35 nt.     Delta G= -3.31 kcal/mol
Anti-antiterminator:   Size=56 nt.     Delta G= -3.46 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
Bases shared by the anti-antitermination and antitermination structures are shown in green
The sequences of the anti-antiterminator, antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

GGAGGCATATAAAGTAGCAGAAGAGAATATCGAAATGACAGCGAAGAATATTGCAGCA
GTGTGGAAAATAGCATCAGAAAAACACTTCTAAatgggggagtgttttttattattatttaataataatgatggta
gttgcttcattaagttaactttatacatagaatagtcttaacatttggatttttaagcggatataagtgaataatttgtatatccatacagaaaaatgtc
gagttgagtcagactatataaaagatttaaaatatttagtgaaggcacagaagggggatactatctATG

    BAS0155 Gene: BAS0155     GI: 49183188     BI number: BAS0155     GOG: COG0010     Description: arginas   G T  A A  C A  A A  G GC CG TA A  A T  G A  A A  A G  T        C A  A      G  A G  |      A  T A  |      T  C A  |      A  A GT       A  G       at AT       A  A      A  g CG       A  A      A  g GC       G  A       Tg A  A      G  A       Cg TG        TA        Tg GC        GC        Ta A  A       TA        Cg A  G       GC        At AT        AT        Cg TG       C  T       At AT        GC        At TG        AT        At                         tttattattatttaataataatgatggtagttgcttcattaagttaactttatacatagaatagtcttaacatttggatttttaagcggatataagtgaataatttgtatatccatacagaaaaatgtcgagttgagtcagactatataaaagatttaaaatatttagtgaaggcacagaagggggatactatctATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family ... can be seen here     ..................................................................................................................