                                                                        Gene putatively regulated by attenuation in B_cereus_ATCC14579

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:150 nt.     Distance to run of Ts=3 nt.   Size=35 nt.     Delta G=-15.20 kcal/mol
Antiterminator: Size=21 nt.     Delta G= -3.10 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

AGAAGTTCTTCGCCCTTATATGGGAGGAAAAACAGTTATTAAGTAAatttaaacattcatcggtat
gagtgattggtaattatgagcgttgtcagtactgtaatgtaggaaggggaaagtaaaattttcctttcctcataatttattttagtagggttgactaact
gtttttcttttgatattatatttgatgtcaatatggaGGTATACCCAAGTCTGGCTGAAGGGATCGGTCTTGA
AAACCGACAGGCGGCGAGAGTCGCGCGGGGGTTCGAATCCCTCTACCTCCTCCAgatata
aTTG

    BC0019 Gene: BC0019     GI: 30018291     BI number: BC0019     GOG: -------     Description: hypothetical Cytosolic Protei            aa           t  a           g  a            at            at            at            gt ta        gc g  c       gc at        gt cg        at t  |       at gt        gc ta        gc ta        at gt       t  | cg        gc gt        ta             taatttattttagtagggttgactaactgtttttcttttgatattatatttgatgtcaatatggaGGTATACCCAAGTCTGGCTGAAGGGATCGGTCTTGAAAACCGACAGGCGGCGAGAGTCGCGCGGGGGTTCGAATCCCTCTACCTCCTCCAgatataaTTG     ..................................................................................................................