Gene putatively regulated by attenuation in B_cereus_ATCC14579
Characteristics of the secondary structures
Terminator: Distance to gene:184 nt. Distance to run of Ts=1 nt. Size=39 nt. Delta G=-10.70 kcal/mol
Antiterminator: Size=31 nt. Delta G=-11.10 kcal/mol
Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case
tcccataaaaggtattgtgttgtacatagatgattctccttaaaaccttacatatgtttgcgttatgcatatgtaagtctagcatggtttgttctttatg
tgtgcttacagttttgtaaggtgagtagtaaagcagtgcaaaagttatttgtataaagtgacgatactgtgacaaacatgttggtatacatgttacgatg
tcgtcttaagtgtaaaaagtaggatgttctcggtataataacaagtggagataaaagaaactataatgagtagtagctgtagataaaaggagaagaagag
ATG
BC0205
Gene: BC0205 GI: 30018442 BI number: BC0205 GOG: ------- Description: hypothetical protei
gt
t t
t c
t t
g gt
c t gt
g t ta
t a at
t t cg
tg gt
gc a g
ta t t
at c |
ta tg
at gc
cg at
at at
ta ta
ta gc
cg ta
gttttgtaaggtgagtagtaaagcagtgcaaaagttatttgtataaagtgacgatactgtgacaaacatgttggtatacatgttacgatgtcgtcttaagtgtaaaaagtaggatgttctcggtataataacaagtggagataaaagaaactataatgagtagtagctgtagataaaaggagaagaagagATG
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