                                                                        Gene putatively regulated by attenuation in B_cereus_ATCC14579

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:82 nt.     Distance to run of Ts=0 nt.   Size=24 nt.     Delta G=-11.80 kcal/mol
Antiterminator: Size=49 nt.     Delta G= -9.50 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

TTATCCATTCGGTCATGTAGATGATAAGGTTGTTACAGAAACGAAGAAGTATTATCAA
TTTGCGACGACGACAAAGCCTGGGCAATTCATTACGAAGGGTGAACCTGATGAATTGT
TAAAGATGAAGCGCGTTCGTATACACCATACAACGACTGTAGAGCAGTTTGCTTCTTC
AATTAAGTAAatataagggctcaatacattttgagctctctttttactttatatttatatatatttttagaattttcttgtattatatatagt
aagaaatctttcaaattaaaggagattatacatATG

    BC0360 Gene: BC0360     GI: 30018568     BI number: BC0360     GOG: COG2309     Description: Aminopeptidas CA T  A T  T C  T TA TA CG GT TA TA Ta Gt |  a |  t |  a |  a |  g       ca A  g      a  t Cg       t  t Gc        at At        at Gc        cg |  a       ta |  a       cg At        gc Ta        gt Gc        gc Ta        at             ctttttactttatatttatatatatttttagaattttcttgtattatatatagtaagaaatctttcaaattaaaggagattatacatATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [E] COG2309 Leucyl aminopeptidase (aminopeptidase T) ... can be seen here     ..................................................................................................................