                                                                        Gene putatively regulated by attenuation in B_cereus_ATCC14579

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:79 nt.     Distance to run of Ts=0 nt.   Size=38 nt.     Delta G=-14.00 kcal/mol
Antiterminator: Size=69 nt.     Delta G= -5.02 kcal/mol
Anti-antiterminator:   Size=57 nt.     Delta G= -4.90 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
Bases shared by the anti-antitermination and antitermination structures are shown in green
The sequences of the anti-antiterminator, antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

atagataggcattccccatacataatagcttttcagcgttaagactagtaaatgtaagaaatcgaaaatagcgtgagctttcataatatcctccaatgtt
tttttgaaaattataacatttttaacttgttatttgtataatttggaaagtgatttaagctaattttaaagtaagaagaatacatattaatatgcaattt
tgcataaggatatgtattttattaaaatataaagattttatactataatgaaaaccgctataaaactaagtaagaataatgtatggagtggagaatagaa
ATG

    BC0362 Gene: BC0362     GI: 30018570     BI number: BC0362     GOG: -------     Description: hypothetical protei             t           t  t           a  a           g  a            tg            gc            at tt       |  a c  g      |  a at        at at        at ta        gt t  t       gt t  t       ta t  |       ta t  |       ta at       |  g cg       a  t a  |      a  a       tt at       t  a      a  t ta       a  g       at at       t  a       cg ta       g  a       gc ta        tg        ta at        ta        at at        ta        ta at        at       a  a a  g      t  |      a  g g  g       ta        tg ta        gc        ta ta        ta        at ta       t  t       ta tg       c  a       at t  t       at        cg tg        at        at ta        ta        ta gt        ta        at                         tttattaaaatataaagattttatactataatgaaaaccgctataaaactaagtaagaataatgtatggagtggagaatagaaATG     ..................................................................................................................