                                                                        Gene putatively regulated by attenuation in B_cereus_ATCC14579

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:160 nt.     Distance to run of Ts=3 nt.   Size=20 nt.     Delta G= -7.40 kcal/mol
Antiterminator: Size=31 nt.     Delta G= -4.60 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

ATTAAAAAACAAGTTTTGGAATAATAGCTTAAAACGTTGGTTACTCGGCCCTGAAGAC
CCTAATTACGTATTGATAAAAATCAACCCCGACACAATTTATTACATCGATGGTGCCG
GTACGACGGAGCCTGAGTTTTTACGACTATAAaataaaacaagcccccccttaggtgggcttgttttgtcgaaaag
ttcttttgaaaaaaacaataaaataggtggaactttctaaagattctgttatataatagcattaacttaaataaactgtattaaaacagattgagaggag
aaataaaaTTG

    BC0460 Gene: BC0460     GI: 30018668     BI number: BC0460     GOG: -------     Description: hypothetical protei   A T  C T  A A  T T  C TG TA        AC AT       T  G A  G      G  A CG        GC AT        CG CG        CG A  C      G  A GC        TG CG        GC CG        GC             TGAGTTTTTACGACTATAAaataaaacaagcccccccttaggtgggcttgttttgtcgaaaagttcttttgaaaaaaacaataaaataggtggaactttctaaagattctgttatataatagcattaacttaaataaactgtattaaaacagattgagaggagaaataaaaTTG     ..................................................................................................................