Gene putatively regulated by attenuation in B_cereus_ATCC_10987

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:175 nt.     Distance to run of Ts=0 nt.   Size=34 nt.     Delta G=-18.60 kcal/mol
Antiterminator: Size=75 nt.     Delta G= -4.90 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

aggaatgttgctgcaacagtgatattagtctaaaacatttttttaatcaaacatatagttatagctttaaaataaatttacaaatttgtcccccttttag
atattgtatctaaagggggatttttgtgttaaaaagaacatctaagatcgataggagaaagttaggatgcccgtacgctactaaagtactactttatttt
atctgaatttttaattatcattttaagtattcgtgaacaatttcctttattatgaaaagaagaggggatagattactaggtattacaagggggcttatta
ATG

    BCE0191


Gene: BCE0191     GI: 42779272     BI number: BCE0191     GOG: COG1506     Description: prolyl oligopeptidase family protein, putativ


 at
t  a
 tg
 gc
 at
|  t
t  t
a  a
t  a
a  a
c  a
a  t
a  a
a  a
c  a
t  t
 at
 at
 ta
t  c
 ta
 ta
 ta
t  t        t
t  t      t  g
 at        at
 cg        ta
 at        at
|  c       gc
|  c       at
|  c      t  |
|  c       ta
|  c       ta
|  t       ta
 at        cg
 at        cg
 at        cg
 ta        cg
 cg        cg
 ta        ta
 gt        gt
            ttttgtgttaaaaagaacatctaagatcgataggagaaagttaggatgcccgtacgctactaaagtactactttattttatctgaatttttaattatcattttaagtattcgtgaacaatttcctttattatgaaaagaagaggggatagattactaggtattacaagggggcttattaATG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[E] COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases ... can be seen here

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