Gene putatively regulated by attenuation in B_cereus_ATCC_10987

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:125 nt.     Distance to run of Ts=0 nt.   Size=26 nt.     Delta G=-15.10 kcal/mol

                                                                        Nomenclature/Definitions

GGTATTCCATTAGAAGCTGTTAAGTATTTTTCGGCAAGCGGTGGTTCTCTTGTTACAG
CTTATATAAGTGAACAGGCAGCATTACCGAGAGCGGTTTATTATAGTGTCTCTGCGAT
AGTTACAATTAAAAATTAAgatataaaaaaagatagatgggataccatctatcttttttgtaattagaacatattgtttcgttgaa
aaatgtatgtcttacctatcacaaaaaaagtctgctttgtatacattaagatgtatggatatatttttataatttaaaaataataggaggagaagtgtAT
G

    BCE0557 --- BCE0558 --- BCE0559 --- BCE0560 --- BCE0561 --- BCE0562


Gene: BCE0557     GI: 42779637     BI number: BCE0557     GOG: -------     Description: hypothetical protein
Gene: BCE0558     GI: 42779638     BI number: BCE0558     GOG: -------     Description: conserved hypothetical protein
Gene: BCE0559     GI: 42779639     BI number: BCE0559     GOG: -------     Description: glycosyl transferase, group 2 family protein
Gene: BCE0560     GI: 42779640     BI number: BCE0560     GOG: COG0677     Description: UDP-glucose/GDP-mannose dehydrogenase family
Gene: BCE0561     GI: 42779641     BI number: BCE0561     GOG: COG0451     Description: NAD-dependent epimerase/dehydratase family protein
Gene: BCE0562     GI: 42779642     BI number: BCE0562     GOG: -------     Description: glycosyl transferase, group 2 family protei


          at
         g  a
          gc
          gc
          ta
          at
          gc
          at
          ta
          at
          gc
          at
          at
            ttttgtaattagaacatattgtttcgttgaaaaatgtatgtcttacctatcacaaaaaaagtctgctttgtatacattaagatgtatggatatatttttataatttaaaaataataggaggagaagtgtATG


                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase ... can be seen here
[MG] COG0451 Nucleoside-diphosphate-sugar epimerases ... can be seen here

    ..................................................................................................................