                                                                        Gene putatively regulated by attenuation in B_halodurans

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:109 nt.     Distance to run of Ts=0 nt.   Size=26 nt.     Delta G=-16.10 kcal/mol

                                                                        Nomenclature/Definitions

CGTTGAAGGTTATGGTACAGCGATTGCTGGCGACACTGGTGGCGCGATCGTCGGAAAC
AAAATCGACGTTCATATGCCGTCAACTGCGGAAGCGCAGCGTTGGGGCCGAAAAACGG
TGAAAGTCACCATTCTTGATTAAtccaaacactaaagcattgacacagggcatttttgctctgtgtttctttttttaatcgat
tgaagtttactcacggataacgagtaccgaatccgcgttttcctttcatccaggaaggtcgtataatgagggaggaacatagaaagagatgggaggacgt
cATG

    BH0056 --- ksgA Gene: BH0056     GI: 15612619     BI number: BH0056     GOG: COG1658     Description: - Gene: ksgA     GI: 15612620     BI number: BH0057     GOG: COG0030     Description: dimethyladenosine transferas           tt          t  t           at           cg           gc           gt           gc           at           cg           at           cg           at           gt             tctttttttaatcgattgaagtttactcacggataacgagtaccgaatccgcgttttcctttcatccaggaaggtcgtataatgagggaggaacatagaaagagatgggaggacgtcATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [L] COG1658 Small primase-like proteins (Toprim domain) ... can be seen here [J] COG0030 Dimethyladenosine transferase (rRNA methylation) ... can be seen here     ..................................................................................................................