Gene putatively regulated by attenuation in B_subtilis

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:186 nt.     Distance to run of Ts=0 nt.   Size=27 nt.     Delta G=-17.50 kcal/mol

                                                                        Nomenclature/Definitions

CTTTCTCGCTGACTTTTTCACAGTGCAAATGATTTTTTATGCAAGCTCTATTCTATAT
TTTTTGAGTGGATTGATGATGATGAAAACAGGCTGAcgcggtcagcctgtttttttatgcggctgaaatgcgg
caccgcatcaacgtttttgtgctggagtcgtgctgattttttttgagcggaattcccattgaacagaaaatttataaatgaataaaaatattaaatatac
gattgaattaatttttattcatgttataatgttaaataatttcacaaagaccaagagggtgaacttgttTTG

    argC --- argJ --- argB --- argD


Gene: argC     GI: 16078184     BI number: BSU11190     GOG: COG0002     Description: N-acetylglutamate gamma-semialdehyde dehydrogenase
Gene: argJ     GI: 16078185     BI number: BSU11200     GOG: COG1364     Description: amino-acid acetyltransferase
Gene: argB     GI: 16078186     BI number: BSU11210     GOG: COG0548     Description: N-acetylglutamate 5-phosphotransferase
Gene: argD     GI: 16078187     BI number: BSU11220     GOG: COG4992     Description: N-acetylornithine aminotransferas


           c
         g  g
          cg
          At
          Gc
          Ta
          Cg
          Gc
          Gc
          At
          Cg
          At
          At
          At
            ttttatgcggctgaaatgcggcaccgcatcaacgtttttgtgctggagtcgtgctgattttttttgagcggaattcccattgaacagaaaatttataaatgaataaaaatattaaatatacgattgaattaatttttattcatgttataatgttaaataatttcacaaagaccaagagggtgaacttgttTTG


                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[E] COG0002 Acetylglutamate semialdehyde dehydrogenase ... can be seen here
[E] COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) ... can be seen here
[E] COG0548 Acetylglutamate kinase ... can be seen here
[E] COG4992 Ornithine/acetylornithine aminotransferase ... can be seen here

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