                                                                        Gene putatively regulated by attenuation in B_subtilis

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:166 nt.     Distance to run of Ts=0 nt.   Size=29 nt.     Delta G= -9.50 kcal/mol
Antiterminator: Size=68 nt.     Delta G=-10.27 kcal/mol
Anti-antiterminator:   Size=21 nt.     Delta G= -3.60 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
Bases shared by the anti-antitermination and antitermination structures are shown in green
The sequences of the anti-antiterminator, antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

GCCTGGGATTGGTTGATGAAAAAGACGGTAAAGACCTTTTATACACATTGGAGCGCGA
ATTGTCTGCTTTGCATGACGCGTTTACAGCTAAATAAatgataaaactcaaacttattaacagtttgggtttt
tttataaccgctatttttctctcatctcataaaagacggtctttttttacacattccttccgaatcgtatagagattcttcgtctcgtttgataaattgt
agtaaaataaaaaagataaatacataaaaaccatagataatggaagttagaagcagggaagaggatgttATG

    ftsW Gene: ftsW     GI: 16078549     BI number: BSU14850     GOG: COG0772     Description: cell-division protei             T           T  T            CG            GC            TA           |  T            CG            TA            GC            TG           |  C            TG            AT            AT            GT           |  A           C  C           G  A            CG            GC            AT           G  A        t           G  A      t  a           T  A      a  a           T  T      t  c TT       A  A       ta A  G      C  A       cg AT       A  a       at GC       C  t       at C  |      A  g       at GT        Ta        cg CG        At        tg GC        Ta        cg AT        Ta        at GT        Ta        at GT        Ta        at                         ttttataaccgctatttttctctcatctcataaaagacggtctttttttacacattccttccgaatcgtatagagattcttcgtctcgtttgataaattgtagtaaaataaaaaagataaatacataaaaaccatagataatggaagttagaagcagggaagaggatgttATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [D] COG0772 Bacterial cell division membrane protein ... can be seen here     ..................................................................................................................