Gene putatively regulated by attenuation in B_thuringiensis_konkukian

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:76 nt.     Distance to run of Ts=0 nt.   Size=21 nt.     Delta G= -8.10 kcal/mol
Antiterminator: Size=41 nt.     Delta G= -3.90 kcal/mol
Anti-antiterminator:   Size=64 nt.     Delta G= -6.35 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
Bases shared by the anti-antitermination and antitermination structures are shown in green
The sequences of the anti-antiterminator, antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

CAACTGAAACAAGCATTTTATCTAGCATTGAACCACTTGTAGCAGCTATCGTTTCAAT
CGCTTGGCTGAATGAATCCTTTGGAGCCTATCAATTACTAGGCGGCCTATGTATCGTT
CTTTCTGTTATTTTCTTAACGATGCCGCAAAAAGAAAATGAAGCTACCTTTTCAACTG
AACAAATATAAaaaatgtcaaaagaggtcgtacaaaacttacgacctcttttgacgttttaaaggaattgtcccgctttctggcaaatacaa
ttacactaacaatcaaaattaggagtgtggcaccATG

    BT9727_0491


Gene: BT9727_0491     GI: 49479860     BI number: BT9727_0491     GOG: -------     Description: hypothetical protei


 TG
A  C
 GC
 CG
|  C
|  A
A  A
A  A
 TA
 TA
 CG
 TA
 TA
 TA
 TA
 AT         A
 TG       T  A
 TA       A  a
|  A      T  a
|  G      A  a
|  C      A  a
|  T       At
|  A       Cg
|  C      A  |
|  C       At
|  T       Gc
|  T       Ta
|  T      C  a        a
G  T      A  |      a  a
T  C      A  |      a  c
C  A      C  |      c  t
T  A       Ta        at
T  C       Ta        ta
T  T       Tg        gc
 CG        Ta        cg
 TA        Cg        ta
 TA        Cg        gc
 GC        At        gc
                        tcttttgacgttttaaaggaattgtcccgctttctggcaaatacaattacactaacaatcaaaattaggagtgtggcaccATG
    ..................................................................................................................