Gene putatively regulated by attenuation in B_thetaiotaomicron_VPI-5482

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:214 nt.     Distance to run of Ts=0 nt.   Size=31 nt.     Delta G=-13.10 kcal/mol
Antiterminator: Size=26 nt.     Delta G= -3.60 kcal/mol
Anti-antiterminator:   Size=23 nt.     Delta G= -4.80 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
Bases shared by the anti-antitermination and antitermination structures are shown in green
The sequences of the anti-antiterminator, antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

tcttattggaatctaatttaaatggggatattcccaaaataagaaaaattaaggcaactaatttattgcgagttagttgcttttttgtatctttaagcat
tgcccccaaaaacggtttgacggccaaaacgggggtaatctaaactaaaaacacatggtaaagatacaaaaaatctccggaatcgaaccttgtttaggtt
ttaccgagttcgatatgctaaaaaatatcgtcaaagttttgcaacgagtgaattaggtcgactccatgctctcttccctttttcggaactggtccgacaa
ATG

    BT0034


Gene: BT0034     GI: 29345444     BI number: BT0034     GOG: -------     Description: hypothetical protei


                      t
                    t  g
                    a  c
           ca        tg
  t       g  a       ta
c  g       gc        tg
a  g       at        at
 at       G  a       at
 gc        Ta        ta
 gc        At        cg
 cg        at        at
 ta        at        at
t  c      c  a       cg
 ta        at        gc
 ta        gt        gt
 tA        cg        at
                        ttttgtatctttaagcattgcccccaaaaacggtttgacggccaaaacgggggtaatctaaactaaaaacacatggtaaagatacaaaaaatctccggaatcgaaccttgtttaggttttaccgagttcgatatgctaaaaaatatcgtcaaagttttgcaacgagtgaattaggtcgactccatgctctcttccctttttcggaactggtccgacaaATG
    ..................................................................................................................