Gene putatively regulated by attenuation in B_thetaiotaomicron_VPI-5482

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:74 nt.     Distance to run of Ts=0 nt.   Size=33 nt.     Delta G=-22.20 kcal/mol

                                                                        Nomenclature/Definitions

catggcaaagaaaacagtagcaagtttgcacgaaggctctaaagaaggtcgtgcttacaccaaggttatcaaaatggtgaaatctccgaaaactggagct
tacgtttttgatgaacaaatggttgcaaacgaaaaagtacaagactttttcaaaaaataatcagaatagcataaaacgctataaacacaaaatcccctca
ttggcaaacagtgaggggattttttattgcttctttttttacttttccaatcctttgttatatctttgtagcataatgtattatacaaataactgtagat
ATG

    BT0914 --- BT0913 --- BT0912 --- BT0911


Gene: BT0914     GI: 29346324     BI number: BT0914     GOG: COG0552     Description: recognition particle-docking protein FtsY
Gene: BT0913     GI: 29346323     BI number: BT0913     GOG: COG0621     Description: putative Fe-S oxidoreductase
Gene: BT0912     GI: 29346322     BI number: BT0912     GOG: COG0776     Description: DNA-binding protein HU
Gene: BT0911     GI: 29346321     BI number: BT0911     GOG: NOG25165     Description: putative integration host factor IHF alpha subuni


           a
         c  a
         g  a
          gc
          ta
          tg
          at
          cg
          ta
          cg
          cg
          cg
          cg
          ta
          at
          at
          at
            tttattgcttctttttttacttttccaatcctttgttatatctttgtagcataatgtattatacaaataactgtagatATG


                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[U] COG0552 Signal recognition particle GTPase ... can be seen here
[J] COG0621 2-methylthioadenine synthetase ... can be seen here
[L] COG0776 Bacterial nucleoid DNA-binding protein ... can be seen here

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