                                                                        Gene putatively regulated by attenuation in B_henselae_Houston-1

                                                                        Characteristics of the secondary structures
Terminator:    Distance from promoter:95 nt.    Distance to gene:12 nt.     Distance to run of Ts=0 nt.   Size=17 nt.     Delta G= -9.10 kcal/mol
Antiterminator:    Distance from promoter:38 nt. Size=67 nt.     Delta G=-12.76 kcal/mol

                                                                        Nomenclature/Definitions
The most likely promoter is: ttaaat-taagat. It has a score value of 72.29 and is shown in blue
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

ttaaattttcattgctaatattctaagattattttattaatgagatgtttttggtcggttacgcaacgatcaataagggaagtaaagccctaagttctaa
aaaaattagctcattatgtgagctttcccggattccgggagtttttgccatgtccaaGTG

    BH14370 Gene: BH14370     GI: 49476099     BI number: BH14370     GOG: -------     Description: DNA-binding protei   a t  t tg at cg ta cg gc at t  | t  | a  | a  | a  | a  | a  | a  | a  | t  | c  | t  | t  | g  | a  | a  | t  | c  | c  | c  | g  | a  | a  | a  | t  | g  | at at gc gc gc a  g        t a  |      a  t t  |       gc a  |       gc a  |       cg cg        cg ta        cg at        ta gt        tg             tttttgccatgtccaaGTG     ..................................................................................................................