                                                                        Gene putatively regulated by attenuation in B_bacteriovorus

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:92 nt.     Distance to run of Ts=1 nt.   Size=26 nt.     Delta G= -9.50 kcal/mol
Antiterminator: Size=45 nt.     Delta G= -6.90 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

GATCTATGTTCAAGTCGGTCAGCGGGTGAATAAGTGGGATGTTGTGGGTGCGGTAGGT
AATACCGGGCGTTCAACAGGACCGCACTTGCACTATGAAGTCCGCATTAATGGTACCG
CCGTAGATCCAATCAACTACATCTTAGACGAATAGACCGGAACCGTTGAAAAAGGCCC
ATCCGACTGCGTTGCCTTGCGGCTGGACCTTTTTGAACGGTTCCTTGTTCTTGGTTTT
GGCAAATATCATGGAAAATCTTTGAGTATAATTTTTTGTAGGCACtacactttaagggtgaggtgtt
tATG

    Bd0400 Gene: Bd0400     GI: 42522014     BI number: Bd0400     GOG: -------     Description: hypothetical protein predicted by Glimmer/Critic AA G  A TA TA G  | CG CG |  C |  C |  C A  A AT GC GC        GC CG       T  C C  A      T  T A  |       GT GC        CG AT        GC TG        TG A  |       CG A  |      A  C GC        GT CG        CG AT        CG GT        TA             CCTTTTTGAACGGTTCCTTGTTCTTGGTTTTGGCAAATATCATGGAAAATCTTTGAGTATAATTTTTTGTAGGCACtacactttaagggtgaggtgtttATG     ..................................................................................................................