                                                                        Gene putatively regulated by attenuation in B_bacteriovorus

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:86 nt.     Distance to run of Ts=2 nt.   Size=27 nt.     Delta G=-13.60 kcal/mol
Antiterminator: Size=14 nt.     Delta G= -9.10 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

TGACCGCCGCCAGCGTTGGGGGCCTTGTCACACTGATGGTCAAAGGCAATCCAGAGCG
TGATCGTCTGGAGAATATGACGAAAGAGCTGACCAACGCTCTGATGCAGGCTAGCAGA
TCGACGATGCTCCAAATTGAGGCCGAAGCTTTGAATTAAcaaaacaccttgccccccaaccgggggactcc
cgaaaaaggagcacccctcgttttttaataatttccacattcccgccggtaaaaggcgcgaatgttaccaagatgtattcaagggttcttcgtagcaaac
cgaaatattaatcATG

    Bd1360 Gene: Bd1360     GI: 42522879     BI number: Bd1360     GOG: -------     Description: putative membrane associated lipoprotei             a           a  a           g  a           c  a            cg            cg            ta ac        cg a  c      a  c cg       g  a cg        gc cg        gc cg        gc cg        gc             tcgttttttaataatttccacattcccgccggtaaaaggcgcgaatgttaccaagatgtattcaagggttcttcgtagcaaaccgaaatattaatcATG     ..................................................................................................................