Gene putatively regulated by attenuation in B_bacteriovorus

                                                                        Characteristics of the secondary structures
Terminator:    Distance from promoter:217 nt.    Distance to gene:0 nt.     Distance to run of Ts=0 nt.   Size=32 nt.     Delta G=-17.80 kcal/mol

                                                                        Nomenclature/Definitions
The most likely promoter is: TTTACA-TATACA. It has a score value of 60.91 and is shown in blue

TTTACAAAGACCCCCATGTCCATTATACAAGTCCCATGTCTTTGTCCGCCGAAGGGGC
TCAGAAGATCCGGGATTATCTTCGCGCAAACATTAAGGAAATCATCAACTTGTCGCGC
GAGGGAAACCCTGAGATCGGCTATTGCCTTAATATAGACTGGTACGAATACTGActttac
caaaagtaaactgaaacccggccgttttaaccaaccggacttcgcggaatttttctggattctgtaaaaagcttctcatgcgaactgaatcgtatgagga
gtttttATG

    Bd1538 --- Bd1539 --- Bd1540


Gene: Bd1538     GI: 42523045     BI number: Bd1538     GOG: -------     Description: conserved hypothetical protein
Gene: Bd1539     GI: 42523046     BI number: Bd1539     GOG: -------     Description: hypothetical protein
Gene: Bd1540     GI: 42523047     BI number: Bd1540     GOG: -------     Description: hypothetical protein predicted by Glimmer/Critic


          tg
         c  a
         a  a
          at
          gc
          cg
          gt
          ta
          at
          cg
          ta
          cg
          tg
          ta
          cg
          gt
            ttttATG
    ..................................................................................................................