                                                                        Gene putatively regulated by attenuation in B_japonicum

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:119 nt.     Distance to run of Ts=0 nt.   Size=26 nt.     Delta G=-20.30 kcal/mol

                                                                        Nomenclature/Definitions

TCGACGAGAAGGTCGCGCGCCTGCACCTCGCCAAGATCGGCGTCAAGCTCACCGAGCT
GCGCAAGGACCAGGCCGACTATATCGGCGTGAAGCAGGAAGGCCCGTACAAGAGCGAT
CACTACCGCTACTGAtccgacctcatcgaaacatcaaagccccggagcgatccggggcttttttgttgcccacccgtctgatacgctct
caggtagagccagaaaaagcctgccaccttcgcagcgggcggcccattgcccggcacatattgtctgacaccgaaagcattgtggaggaagtgcgATG

    bll5943 --- bll5942 Gene: bll5943     GI: 27381054     BI number: bll5943     GOG: -------     Description: - Gene: bll5942     GI: 27381053     BI number: bll5942     GOG: COG2072     Description: flavin-binding family monooxygenas           cg          g  a           at           gc           gc           cg           cg           cg           cg           gc           at           at           at             tttgttgcccacccgtctgatacgctctcaggtagagccagaaaaagcctgccaccttcgcagcgggcggcccattgcccggcacatattgtctgacaccgaaagcattgtggaggaagtgcgATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [P] COG2072 Predicted flavoprotein involved in K+ transport ... can be seen here     ..................................................................................................................