Gene putatively regulated by attenuation in B_suis_1330_I

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:210 nt.     Distance to run of Ts=0 nt.   Size=21 nt.     Delta G=-16.10 kcal/mol

                                                                        Nomenclature/Definitions

CGGCTTCAGGGCCTTATGAAACAGGAAGCTGATCCGATGGTCGGGTTCCAATTAAATC
GAAAAGAGGGGGCGCTCCTTGCGTCCCCTTTTATCCTCGGCGTTTTATGCTGGGTCTG
GTCGCCAATATATAGCGAACAAAAAGAACCCAAATTCTACGTCATGTTTTTTGTTTCG
TGCGCTTCGGGGACCAAAACAATTGCGAATATCTTTATTCCATAGaaacatgggaaaagctgttctc
gtccgctgaaaattgcgctaaaccaccatcgtcaatagctgggtttgaggagacttcccGTG

    BR1378


Gene: BR1378     GI: 23502249     BI number: BR1378     GOG: COG1167     Description: aminotransferase, class


           C
         C  T
         T  T
          CG
          GC
          CG
          GT
          GC
          GC
          GC
          GC
            TTTTATCCTCGGCGTTTTATGCTGGGTCTGGTCGCCAATATATAGCGAACAAAAAGAACCCAAATTCTACGTCATGTTTTTTGTTTCGTGCGCTTCGGGGACCAAAACAATTGCGAATATCTTTATTCCATAGaaacatgggaaaagctgttctcgtccgctgaaaattgcgctaaaccaccatcgtcaatagctgggtttgaggagacttcccGTG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs ... can be seen here

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