Gene putatively regulated by attenuation in C_crescentus
Characteristics of the secondary structures
Terminator: Distance to gene:147 nt. Distance to run of Ts=2 nt. Size=24 nt. Delta G= -7.90 kcal/mol
Antiterminator: Size=43 nt. Delta G= -6.64 kcal/mol
Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case
GAAGCCTCGACCGTTGACCTGTCGCAGGAGTTCACCGGACTGATCACTACTCAGCGCG
CCTACTCGGCTTCGTCGAAGATCATCACGACCGCTGACCAGATGCTTGAGGAACTCTT
GAATATTAAGCGCTAAtcatagggcttaacattctttaattcttgtgtttcacactgagacactacggactgctaaggagccatcttg
tttaggcctttctttactattggaattaagccgctgttattaggcggcgcctatagtggccttcaacagtgatggttgtgggaaaggcgtaaagccATG

CC0903
Gene: CC0903 GI: 16125155 BI number: CC0903 GOG: NOG06387 Description: conserved hypothetical protei
CT
T T
C G
A A
A A
G T
G A
AT
GT
TA
TA tc
CG A a
GC At
TG Ta
A | Cg
GC G g
AT Cg
C A Gc
C A At
At At
Gc Ta
Ta Ta
cattctttaattcttgtgtttcacactgagacactacggactgctaaggagccatcttgtttaggcctttctttactattggaattaagccgctgttattaggcggcgcctatagtggccttcaacagtgatggttgtgggaaaggcgtaaagccATG
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