Gene putatively regulated by attenuation in C_crescentus

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:64 nt.     Distance to run of Ts=0 nt.   Size=30 nt.     Delta G=-28.30 kcal/mol
Antiterminator: Size=71 nt.     Delta G=-19.55 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

AGCCATGCCGATGATCACGGCCACGGCCATGACGACCATGGACACGGCCATGACGATC
ACGGCCATGACGCCCATGGTCACGGCGGCCACGGACATGATGACCACGGCCATCACGA
AGACCATGGCCACGGTCACCACGACGCGCCCAAAAAGGAACTTGAGCACGCTCACCAC
TAGGTCGAGCGCAGGTTCAGAACCCAGAGCCCCGGATCCCAGGATCCGGGGCTCTTTC
TTTTCTGATCCGTCGTGAAAAGGCGTTTGCGCCTTGCATCGTCCGGCGCGCCACAGCA
TTGAGAGGCCATG

    CC1237


Gene: CC1237     GI: 16125486     BI number: CC1237     GOG: COG0861     Description: hypothetical protei


 CT
A  A
 CG
 CG
 AT
|  C
 CG
 TA
 CG
 GC
 CG
A  |
C  |
G  |
A  |
 GC
 TA
 TG
 CG
 AT
 AT
 GC
G  A
A  G       CA
A  A      C  G
A  A       CG
A  C       TA
A  C       AT
C  C       GC
C  A       GC
C  G       CG
G  A       CG
 CG        CG
 GC        CG
C  C       GC
A  C       AT
 GC        GC
 CG        AT
            TTCTTTTCTGATCCGTCGTGAAAAGGCGTTTGCGCCTTGCATCGTCCGGCGCGCCACAGCATTGAGAGGCCATG


                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance ... can be seen here

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