Gene putatively regulated by attenuation in C_trachomatis

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:136 nt.     Distance to run of Ts=0 nt.   Size=28 nt.     Delta G=-17.80 kcal/mol

                                                                        Nomenclature/Definitions

TTTTAGATGTCCACGGTTATTTGGCTGCTAAAAAGGGACAACAAGTTATGCGGTCGGG
ATCAAGTATATGGGTAGGATCACACGGGCCTATTTTTTATAAAGTTTTCTAAgttcttatt
cagttaaagtcggctcatctattgaaaaatagatgagcttttttttgccaaaagcttttactaaggaatctaggtacttgattcttttatcatccaaacg
tatgttgggaccaaaattagttagttgcaaacgtagtgttgagagtatgtgcgttttgtaaaagtaaagagagggtggcttATG

    mdhC


Gene: mdhC     GI: 15605100     BI number: CT376     GOG: COG0039     Description: Malate Dehyrogenas


          aa
         g  a
          ta
          ta
          at
          ta
          cg
          ta
          at
          cg
          ta
          cg
          gc
          gt
            tttttttgccaaaagcttttactaaggaatctaggtacttgattcttttatcatccaaacgtatgttgggaccaaaattagttagttgcaaacgtagtgttgagagtatgtgcgttttgtaaaagtaaagagagggtggcttATG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[C] COG0039 Malate/lactate dehydrogenases ... can be seen here

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