                                                                        Gene putatively regulated by attenuation in C_trachomatis

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:27 nt.     Distance to run of Ts=0 nt.   Size=35 nt.     Delta G=-22.30 kcal/mol

                                                                        Nomenclature/Definitions

ATGACTACGGCAACAACTCTATCTGTACTGGTCATTTTGTTATTCGTTGGGGGAGGTT
CTATTTTCAATTTTGCATTCATTATGACAGTGGGGATCTTGTTAGGAACGCTATCTTC
ATTGTACATAGCTCCTCCGCTTCTCTTATTCATGGTGCGTAAGGAAGAACAAAATTCC
CTACGGTAAatgatgaaatacgcttgggcgtatatgatcctaaaattgtgggatgattatggggctcctttcctcctaaaggaggagggagctt
ttttttaacaggagttttccttcggtaggtatATG

    recJ Gene: recJ     GI: 15605174     BI number: CT447     GOG: COG0608     Description: ssDNA Exonucleas           aa          t  a           cg           cg           ta           cg           cg          t  |           ta           tg           cg           cg           ta           cg           gc           gt           gt           gt             tttttaacaggagttttccttcggtaggtatATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [L] COG0608 Single-stranded DNA-specific exonuclease ... can be seen here     ..................................................................................................................