                                                                        Gene putatively regulated by attenuation in C_pneumoniae_AR39

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:130 nt.     Distance to run of Ts=0 nt.   Size=17 nt.     Delta G= -7.30 kcal/mol
Antiterminator: Size=17 nt.     Delta G= -3.80 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

agctgaggatcttctttgtacctcttttgattcgaaaagaggtgctattgtgagttgccaatagcaacgatccaccttcgtttttgaaaagatacatcag
ttgctaagggaacttttcagaaaatatcataaaaaactcccaagattttggcttggaaagcgagcctttcttgctacttttgttacaacaaaagtgttct
attttaacgtgcgtatcatttgtgactaagagatagacttgctttctttatctatcttctgtattggaaagaaagccccttgagggaaaaaaaggttgtt
ATG

    CP0761 Gene: CP0761     GI: 16753027     BI number: CP0761     GOG: -------     Description: polymorphic membrane protein G famil   t         a t  t      a  a t  g      g  g a  g       gc gc        tg at        ta at        cg cg        gc cg        gc             tttcttgctacttttgttacaacaaaagtgttctattttaacgtgcgtatcatttgtgactaagagatagacttgctttctttatctatcttctgtattggaaagaaagccccttgagggaaaaaaaggttgttATG     ..................................................................................................................