                                                                        Gene putatively regulated by attenuation in C_tepidum_TLS

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:133 nt.     Distance to run of Ts=0 nt.   Size=30 nt.     Delta G= -8.10 kcal/mol
Antiterminator: Size=33 nt.     Delta G= -7.01 kcal/mol

                                                                        Nomenclature/Definitions
Bases shared by the antitermination and termination structures are shown in red
The sequences of the antiterminator and terminator structures are underlined
Coding regions are in CAPS, non-coding regions are in lower case

TTCACTGGTGTCTGAAAGGTTGTATTTCTCCAGCTCTTTAACGATGGCTTCGCCGGTT
GCCGGTTTCAGGTTGATGCGCTCTTCCTCGTCGAAAATCTTGTCAGCAGAGAACGCCC
GCCCGGTTTCGTGAAACAGGTTGTCCAGCGGATTTTCGGCGATCTGGTTTTTCAGGGC
AAACTCCTTTTCCTTGAATGCACGTAATCTGGAAAGCAGCGCCTCGATGTCTTTATCA
GAAGCGTCGCCTGAAAAAAAGAAACGATAGCTATTTGACAGTGCTCTTATCGTTGGCA
TAAAGAGCACTTG

    CT0904 Gene: CT0904     GI: 21673732     BI number: CT0904     GOG: -------     Description: hypothetical protei GT C  G TA TA TA GC        GA G  A      G  T CG       C  T CG        GT |  T       AT |  T      C  C |  G       CG |  T       TG |  C       GC |  C       TG |  A       TA CG        GT GC        GC CG        AT CG        CG             GTTTTTCAGGGCAAACTCCTTTTCCTTGAATGCACGTAATCTGGAAAGCAGCGCCTCGATGTCTTTATCAGAAGCGTCGCCTGAAAAAAAGAAACGATAGCTATTTGACAGTGCTCTTATCGTTGGCATAAAGAGCACTTG     ..................................................................................................................