Gene putatively regulated by attenuation in C_acetobutylicum

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:179 nt.     Distance to run of Ts=0 nt.   Size=35 nt.     Delta G=-19.40 kcal/mol

                                                                        Nomenclature/Definitions

GCGATAAAGAATCATAGTAATTTAGAGTAGaacatttcttttgcatgattttttaacataaacatacacacaaagaac
cgttgtaatagcataaaaaatgctgttatagcggttttttgttttaaaaagtgtgtgggaatgtttttaaaatataaagtacttatatattaggacttat
gaattcatttgattttacgtttaatattgttaaaaataataatgataaaaaaggtcattattgacatataagatgaaagacaataaaatatagtgagatt
aaatgaaggagatgaggattatTTG

    CAC0398


Gene: CAC0398     GI: 15893689     BI number: CAC0398     GOG: COG4842     Description: Uncharacterized small conserved protein, homolog of YUKE/YFJA B.subtili


           a
         a  a
         a  a
          ta
          at
          cg
          gc
          at
          tg
          at
          at
          ta
          gt
          ta
          tg
          gc
          cg
          cg
            ttttttgttttaaaaagtgtgtgggaatgtttttaaaatataaagtacttatatattaggacttatgaattcatttgattttacgtttaatattgttaaaaataataatgataaaaaaggtcattattgacatataagatgaaagacaataaaatatagtgagattaaatgaaggagatgaggattatTTG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[S] COG4842 Uncharacterized protein conserved in bacteria ... can be seen here

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