                                                                        Gene putatively regulated by attenuation in C_acetobutylicum

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:118 nt.     Distance to run of Ts=0 nt.   Size=39 nt.     Delta G=-24.30 kcal/mol

                                                                        Nomenclature/Definitions

TATGCTGTTATGGCATTATTCCTATTTGGATTATATGCCTTCTTTGATGTAGTAGGTT
GGAGTAAAACTTCTAGAGCTGAAAAAAGAAATACAGGCAAGAAAATGGTAATAAAACC
CAAAGCAAAGCCAAATAGAGTTAAGAAGAAGGATGGAAAGTAAtacttttcatccttcttcttttgtt
gaaaattaacagtatcttgttataaatatattaaatgtaaaaaaatatggttgaatttccataaaatggtgatataataatagaaaaagagttcatttgc
agtaaggagaatttatATG

    CAC1043 Gene: CAC1043     GI: 15894330     BI number: CAC1043     GOG: COG0457,COG1396     Description: Xre family DNA-binding domain and TPR-repeat containing protei            A          A  t          T  a           Gc           At           At           At           Gt           Gc           Ta           At           Gc           Gc           At           At           Gc           At           At           Gc           At             tttgttgaaaattaacagtatcttgttataaatatattaaatgtaaaaaaatatggttgaatttccataaaatggtgatataataatagaaaaagagttcatttgcagtaaggagaatttatATG                                                                         Orthologous genes that have a predicted attenuator, grouped in COG families [R] COG0457 FOG: TPR repeat ... can be seen here [K] COG1396 Predicted transcriptional regulators ... can be seen here     ..................................................................................................................