Gene putatively regulated by attenuation in C_perfringens

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:204 nt.     Distance to run of Ts=0 nt.   Size=35 nt.     Delta G=-17.70 kcal/mol

                                                                        Nomenclature/Definitions

ttatatagaaaaaaagacaagcttaaaaattaatagtaggtaaataataaaagtaaggcaagtaatattagatattatttgccttacttttatattttag
aagttttagttaaaagcattagagttatgtttataacaattattattagtagaatatataaaattttatatgaaaaatatatagtataattaatttatgt
atttagcctaacactattgatctagagataataaatgcatgtttaaatattgataatgttaattttagtgcaatatgtgtaaataattaaaaaggagatg
ATG

    CPE0342


Gene: CPE0342     GI: 18309324     BI number: CPE0342     GOG: COG0350     Description: probable methylated-DNA-protein-cystein methyltransferas


           a
         t  g
          ta
          at
          ta
          at
          at
          ta
          gt
          at
          at
          cg
          gc
          gc
          at
          at
          ta
          gc
            ttttatattttagaagttttagttaaaagcattagagttatgtttataacaattattattagtagaatatataaaattttatatgaaaaatatatagtataattaatttatgtatttagcctaacactattgatctagagataataaatgcatgtttaaatattgataatgttaattttagtgcaatatgtgtaaataattaaaaaggagatgATG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[L] COG0350 Methylated DNA-protein cysteine methyltransferase ... can be seen here

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