Gene putatively regulated by attenuation in C_perfringens

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:148 nt.     Distance to run of Ts=0 nt.   Size=30 nt.     Delta G=-15.90 kcal/mol

                                                                        Nomenclature/Definitions

atttttcatattattatagtaagaaaacttttaaaagccatctcatttaaacattaatattaattttttacttttaataaatacttctccaaaacaaaat
ctattataaaaaaataaagagtggttagcatgaatttgctcaccactcttttatagaatttaaagtattaaggcaattttattgttaattcagtaaacat
tttacatatacctctattaacaaattcattttatcatgtatactataggtatagttatgacatatgtcttataatatttgcttttataggaggtaagcca
TTG

    CPE0347


Gene: CPE0347     GI: 18309329     BI number: CPE0347     GOG: COG0664     Description: probable transcriptional regulato


          aa
         g  t
         t  t
          at
          cg
          gc
          at
         t  c
          ta
          gc
          gc
          ta
          gc
          at
          gc
            ttttatagaatttaaagtattaaggcaattttattgttaattcagtaaacattttacatatacctctattaacaaattcattttatcatgtatactataggtatagttatgacatatgtcttataatatttgcttttataggaggtaagccaTTG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases ... can be seen here

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