Gene putatively regulated by attenuation in C_perfringens

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:159 nt.     Distance to run of Ts=0 nt.   Size=29 nt.     Delta G=-16.20 kcal/mol

                                                                        Nomenclature/Definitions

TTATATACTCACTAGTTCATAAGAAGTTAACAGAAGGTGTTAATATTGGTGGAGTTAA
GGGCTAAatttattagcatttaaaaaagaaaataagattattaaaataagagcagatgtcacttttagtgaggtctgcttttttagttaaaataa
aattaaaatttaaatttacaataatcagtatagttatttagaatttttgctatataattaattagtgactttaaactaataatttaaggtttgccaatta
gacttaaaacttaataatgaaattttgatttaaatggaggtaataatTTG

    CPE0579 --- CPE0580


Gene: CPE0579     GI: 18309561     BI number: CPE0579     GOG: COG0398     Description: conserved hypothetical protein
Gene: CPE0580     GI: 18309562     BI number: CPE0580     GOG: COG0247     Description: probable iron-sulfur binding reductas


           t
         t  t
         t  a
          cg
          at
          cg
          ta
         g  g
          tg
          at
          gc
          at
          cg
          gc
          at
            tttttagttaaaataaaattaaaatttaaatttacaataatcagtatagttatttagaatttttgctatataattaattagtgactttaaactaataatttaaggtttgccaattagacttaaaacttaataatgaaattttgatttaaatggaggtaataatTTG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[S] COG0398 Uncharacterized conserved protein ... can be seen here
[C] COG0247 Fe-S oxidoreductase ... can be seen here

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