Gene putatively regulated by attenuation in C_perfringens

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:56 nt.     Distance to run of Ts=2 nt.   Size=33 nt.     Delta G=-17.00 kcal/mol

                                                                        Nomenclature/Definitions

ATATCCAGACGAGGTATTAGAAAAGGATCCTATAAGCATTACAAATTTAAAGATTAAT
GTTGATGTTGAAATTGATGGCACAACAATTACAGGAAATACACTTTAAaataagtctatatttt
aagtagaaattgcttttaatatgcagattaagagctaatttaataaatagtttcttaaattataaatacaatcaatttaaaaaagcctatggaatataat
gttctatgggctttaattttatgctatattttatttaaggtataagggcaataatatttattaaagaagagggttattATG

    CPE0650


Gene: CPE0650     GI: 18309632     BI number: CPE0650     GOG: COG2865     Description: conserved hypothetical protei


           a
         t  a
         a  t
          tg
          at
          at
          gc
          gt
          ta
          at
          tg
          cg
          cg
          gc
          at
          at
          at
            aattttatgctatattttatttaaggtataagggcaataatatttattaaagaagagggttattATG
                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[K] COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen ... can be seen here

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