Gene putatively regulated by attenuation in C_perfringens

                                                                        Characteristics of the secondary structures
Terminator:    Distance to gene:101 nt.     Distance to run of Ts=0 nt.   Size=40 nt.     Delta G=-22.20 kcal/mol

                                                                        Nomenclature/Definitions

AGAGAGAAAAAAGACCGCAGAATCCTTACATATACATAGAAATACATTGAATTATAGA
CTAGAGAGAATTGAGGAAATAACAGGCTTAAGCTTTGATAATTATTTAGATTTATTTC
AATTTTTGATTGCATATATAGTAAGTCAATTAAAATAAaaaaaggttttctttgtgcgtttgcataaagaaa
acctttttattttagtgatattaaataatgattttgaatatgaaaacttatacaatgaaaatcgtcaatataaataagaataaatgagtttaataagaag
gaggaatttattGTG

    CPE0860


Gene: CPE0860     GI: 18309842     BI number: CPE0860     GOG: COG2610     Description: probable gluconate permeas


          tt
         g  t
          cg
          gc
          ta
          gt
          ta
          ta
          ta
          cg
          ta
          ta
          ta
          ta
          gc
          gc
          at
          at
          at
          at
            tattttagtgatattaaataatgattttgaatatgaaaacttatacaatgaaaatcgtcaatataaataagaataaatgagtttaataagaaggaggaatttattGTG


                                                                        Orthologous genes that have a predicted attenuator, grouped in COG families

[GE] COG2610 H+/gluconate symporter and related permeases ... can be seen here

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